CBG22870 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG22870 T301609_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.904 0.586
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.848 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG22870 Nuclear receptor 24 96

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE08691 Caenorhabditis remanei CRE08691 I 0.985
CBG06611 Caenorhabditis briggsae CBG06611 I 0.985
CRE18430 Caenorhabditis remanei CRE18430 I 0.985
CBG06601 Caenorhabditis briggsae CBG06601 I 0.985
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.981
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.978
CJA09697 Caenorhabditis japonica CJA09697 I 0.966
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.965
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.951
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.950
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.938
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.933
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.933
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.933
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.918
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.917
CBN21486 Caenorhabditis brenneri CBN21486 I 0.911
CBN28290 Caenorhabditis brenneri CBN28290 I 0.911
CBG20729 Caenorhabditis briggsae CBG20729 I 0.909
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.904
CBN23838 Caenorhabditis brenneri CBN23838 I 0.903
CRE15644 Caenorhabditis remanei CRE15644 I 0.903
CBG20727 Caenorhabditis briggsae CBG20727 I 0.898
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.892
CRE15675 Caenorhabditis remanei CRE15675 I 0.891
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.883
CRE31070 Caenorhabditis remanei CRE31070 I 0.870
CBG09320 Caenorhabditis briggsae CBG09320 I 0.870
CJA28065 Caenorhabditis japonica CJA28065 I 0.863
L898_g12798 Steinernema monticolum L898_g12798 I 0.862
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.860
CRE30948 Caenorhabditis remanei CRE30948 I 0.858
CBG09567 Caenorhabditis briggsae CBG09567 I 0.856
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.848
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.847
L898_g3512 Steinernema monticolum L898_g3512 I 0.846
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.839
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.820
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.817
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.816
L889_g6692 Steinernema feltiae L889_g6692 I 0.813
L898_g3514 Steinernema monticolum L898_g3514 I 0.813
CBG06599 Caenorhabditis briggsae CBG06599 I 0.813
CBG06609 Caenorhabditis briggsae CBG06609 I 0.813
L892_g2781 Steinernema scapterisci L892_g2781 I 0.811
Minc14668 Meloidogyne incognita Minc14668 I 0.808
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.804
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.803
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.802
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.802
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.799
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.797
L889_g6695 Steinernema feltiae L889_g6695 I 0.791
CRE00301 Caenorhabditis remanei CRE00301 I 0.789
CBN12210 Caenorhabditis brenneri CBN12210 I 0.789
nhr-45 Caenorhabditis elegans WBGene00003635 I 0.789
CBG14515 Caenorhabditis briggsae CBG14515 I 0.789
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.789
CJA02156 Caenorhabditis japonica CJA02156 I 0.789
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.787
L889_g6694 Steinernema feltiae L889_g6694 I 0.779
nhr-218 Caenorhabditis elegans WBGene00011750 I 0.778
L893_g18997 Steinernema glaseri L893_g18997 I 0.774
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.773
L893_g18992 Steinernema glaseri L893_g18992 I 0.771
L898_g3515 Steinernema monticolum L898_g3515 I 0.768
L892_g2780 Steinernema scapterisci L892_g2780 I 0.764
L892_g2782 Steinernema scapterisci L892_g2782 I 0.759
L889_g6696 Steinernema feltiae L889_g6696 I 0.751
CBN13569 Caenorhabditis brenneri CBN13569 I 0.750
CBN00434 Caenorhabditis brenneri CBN00434 I 0.748
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.745