L892_g2782 (Steinernema scapterisci)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L892_g2782 T309266_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.942 0.543
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.810 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g2782.t2 Nuclear receptor 191 261

Links

Other Nuclear receptor family TFs
Other Steinernema scapterisci TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.993
L898_g3512 Steinernema monticolum L898_g3512 I 0.979
L889_g6696 Steinernema feltiae L889_g6696 I 0.967
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.955
CBG09567 Caenorhabditis briggsae CBG09567 I 0.946
CRE30948 Caenorhabditis remanei CRE30948 I 0.946
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.942
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.940
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.940
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.940
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.940
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.939
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.934
L893_g18997 Steinernema glaseri L893_g18997 I 0.931
L889_g6804 Steinernema feltiae L889_g6804 I 0.928
L893_g18993 Steinernema glaseri L893_g18993 I 0.925
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.919
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.919
L892_g10843 Steinernema scapterisci L892_g10843 I 0.912
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.909
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.900
L898_g21763 Steinernema monticolum L898_g21763 I 0.898
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.888
L892_g14834 Steinernema scapterisci L892_g14834 N 0.885
L898_g12798 Steinernema monticolum L898_g12798 I 0.879
CBG16982 Caenorhabditis briggsae CBG16982 I 0.876
L898_g19019 Steinernema monticolum L898_g19019 I 0.876
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.876
L889_g6799 Steinernema feltiae L889_g6799 I 0.868
L898_g3515 Steinernema monticolum L898_g3515 I 0.867
L889_g6798 Steinernema feltiae L889_g6798 I 0.866
CBG20729 Caenorhabditis briggsae CBG20729 I 0.864
CBN23838 Caenorhabditis brenneri CBN23838 I 0.858
CRE15644 Caenorhabditis remanei CRE15644 I 0.858
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.857
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.855
L893_g27930 Steinernema glaseri L893_g27930 I 0.855
L889_g6694 Steinernema feltiae L889_g6694 I 0.854
CRE15675 Caenorhabditis remanei CRE15675 I 0.853
SMUV_0000721901 Syphacia muris SMUV_0000721901 I 0.853
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.852
L889_g6695 Steinernema feltiae L889_g6695 I 0.849
L898_g12799 Steinernema monticolum L898_g12799 I 0.849
L892_g14817 Steinernema scapterisci L892_g14817 I 0.848
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.844
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.843
L898_g3514 Steinernema monticolum L898_g3514 I 0.843
L889_g6792 Steinernema feltiae L889_g6792 I 0.842
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.842
CBG20727 Caenorhabditis briggsae CBG20727 I 0.838
L889_g6797 Steinernema feltiae L889_g6797 I 0.832
L889_g6692 Steinernema feltiae L889_g6692 I 0.832
L893_g18992 Steinernema glaseri L893_g18992 I 0.828
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.827
Minc14668 Meloidogyne incognita Minc14668 I 0.826
L892_g2780 Steinernema scapterisci L892_g2780 I 0.824
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.822
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.821
CJA28065 Caenorhabditis japonica CJA28065 I 0.818
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.814
L892_g2781 Steinernema scapterisci L892_g2781 I 0.814
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.810
CBG06609 Caenorhabditis briggsae CBG06609 I 0.805
CBG06599 Caenorhabditis briggsae CBG06599 I 0.805
CRE31070 Caenorhabditis remanei CRE31070 I 0.803
CBG06611 Caenorhabditis briggsae CBG06611 I 0.803
CBG09320 Caenorhabditis briggsae CBG09320 I 0.803
CRE18430 Caenorhabditis remanei CRE18430 I 0.803
CBG06601 Caenorhabditis briggsae CBG06601 I 0.803
CBN28290 Caenorhabditis brenneri CBN28290 I 0.803
CBN21486 Caenorhabditis brenneri CBN21486 I 0.803
CRE08749 Caenorhabditis remanei CRE08749 I 0.797
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.795
L889_g8185 Steinernema feltiae L889_g8185 I 0.789
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.789
CRE10693 Caenorhabditis remanei CRE10693 I 0.785
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.785
CRE15097 Caenorhabditis remanei CRE15097 I 0.785
CBN13200 Caenorhabditis brenneri CBN13200 I 0.785
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.784
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.783
CBN13569 Caenorhabditis brenneri CBN13569 I 0.775
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.772
PTRK_0000573200 Parastrongyloides trichosuri PTRK_0000573200 N 0.762
L898_g4013 Steinernema monticolum L898_g4013 I 0.761
CJA09697 Caenorhabditis japonica CJA09697 I 0.760
CBG22870 Caenorhabditis briggsae CBG22870 I 0.759
CRE08691 Caenorhabditis remanei CRE08691 I 0.759
BXY_0200500 Bursaphelenchus xylophilus BXY_0200500 N 0.758
CBG15881 Caenorhabditis briggsae CBG15881 I 0.756
CBG04928 Caenorhabditis briggsae CBG04928 I 0.756
L596_g14580 Steinernema carpocapsae L596_g14580 N 0.753
CRE05044 Caenorhabditis remanei CRE05044 I 0.749