HCOI01190000 (Haemonchus contortus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HCOI01190000 T308790_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.948 0.571
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.899 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI01190000.t1 Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Haemonchus contortus TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.994
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.976
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.965
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.955
CBG09567 Caenorhabditis briggsae CBG09567 I 0.954
CRE30948 Caenorhabditis remanei CRE30948 I 0.952
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.951
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.948
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.940
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.940
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.940
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.934
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.932
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.926
L892_g2782 Steinernema scapterisci L892_g2782 I 0.919
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.913
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.909
CRE31070 Caenorhabditis remanei CRE31070 I 0.903
CBN21486 Caenorhabditis brenneri CBN21486 I 0.903
CBG09320 Caenorhabditis briggsae CBG09320 I 0.903
CBN28290 Caenorhabditis brenneri CBN28290 I 0.903
CJA28065 Caenorhabditis japonica CJA28065 I 0.901
L889_g6798 Steinernema feltiae L889_g6798 I 0.901
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.899
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.899
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.897
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.893
CBG20729 Caenorhabditis briggsae CBG20729 I 0.891
CRE15675 Caenorhabditis remanei CRE15675 I 0.890
CRE15644 Caenorhabditis remanei CRE15644 I 0.884
CBN23838 Caenorhabditis brenneri CBN23838 I 0.884
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.880
CBG20727 Caenorhabditis briggsae CBG20727 I 0.879
L892_g14817 Steinernema scapterisci L892_g14817 I 0.878
L898_g19019 Steinernema monticolum L898_g19019 I 0.873
L893_g18993 Steinernema glaseri L893_g18993 I 0.868
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.868
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.867
L898_g4013 Steinernema monticolum L898_g4013 I 0.865
L889_g6797 Steinernema feltiae L889_g6797 I 0.858
L889_g6799 Steinernema feltiae L889_g6799 I 0.857
CBG16982 Caenorhabditis briggsae CBG16982 I 0.856
L893_g18997 Steinernema glaseri L893_g18997 I 0.851
L898_g21763 Steinernema monticolum L898_g21763 I 0.851
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.838
CBG04928 Caenorhabditis briggsae CBG04928 I 0.836
CBG15881 Caenorhabditis briggsae CBG15881 I 0.831
CRE05044 Caenorhabditis remanei CRE05044 I 0.831
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.825
CBG06387 Caenorhabditis briggsae CBG06387 I 0.823
CBN13200 Caenorhabditis brenneri CBN13200 I 0.823
CBG06609 Caenorhabditis briggsae CBG06609 I 0.820
CBG06599 Caenorhabditis briggsae CBG06599 I 0.820
CBN13569 Caenorhabditis brenneri CBN13569 I 0.818
CRE10693 Caenorhabditis remanei CRE10693 I 0.818
CRE15097 Caenorhabditis remanei CRE15097 I 0.818
CRE27862 Caenorhabditis remanei CRE27862 I 0.816
CJA19466 Caenorhabditis japonica CJA19466 I 0.802
CBG22870 Caenorhabditis briggsae CBG22870 I 0.802
L893_g27930 Steinernema glaseri L893_g27930 I 0.801
L889_g6804 Steinernema feltiae L889_g6804 I 0.794
L898_g3512 Steinernema monticolum L898_g3512 I 0.793
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.786
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.786
L892_g10843 Steinernema scapterisci L892_g10843 I 0.783
L898_g3515 Steinernema monticolum L898_g3515 I 0.781
CJA09697 Caenorhabditis japonica CJA09697 I 0.781
L889_g6792 Steinernema feltiae L889_g6792 I 0.777
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.776
L898_g3514 Steinernema monticolum L898_g3514 I 0.774
L892_g14814 Steinernema scapterisci L892_g14814 N 0.772
CRE08749 Caenorhabditis remanei CRE08749 I 0.770
CRE18698 Caenorhabditis remanei CRE18698 I 0.768
nhr-218 Caenorhabditis elegans WBGene00011750 I 0.765
L898_g19021 Steinernema monticolum L898_g19021 I 0.765
L889_g6695 Steinernema feltiae L889_g6695 I 0.765
L889_g8185 Steinernema feltiae L889_g8185 I 0.764
CBG06601 Caenorhabditis briggsae CBG06601 I 0.762
CBG06611 Caenorhabditis briggsae CBG06611 I 0.762
CRE18430 Caenorhabditis remanei CRE18430 I 0.761
nhr-212 Caenorhabditis elegans WBGene00020153 I 0.758
L892_g2781 Steinernema scapterisci L892_g2781 I 0.757
L889_g6694 Steinernema feltiae L889_g6694 I 0.757
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.755
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.753
CRE08691 Caenorhabditis remanei CRE08691 I 0.753
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.753
L889_g8187 Steinernema feltiae L889_g8187 I 0.749