L596_g14588 (Steinernema carpocapsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L596_g14588 T308942_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.938 0.529
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.801 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g14588.t1 Nuclear receptor 6 76
L596_g14588.t2 Nuclear receptor 6 76

Links

Other Nuclear receptor family TFs
Other Steinernema carpocapsae TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L892_g2782 Steinernema scapterisci L892_g2782 I 0.993
L898_g3512 Steinernema monticolum L898_g3512 I 0.973
L889_g6696 Steinernema feltiae L889_g6696 I 0.958
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.953
CRE30948 Caenorhabditis remanei CRE30948 I 0.942
CBG09567 Caenorhabditis briggsae CBG09567 I 0.940
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.939
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.938
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.931
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.931
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.931
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.929
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.923
L889_g6804 Steinernema feltiae L889_g6804 I 0.916
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.913
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.913
L893_g18997 Steinernema glaseri L893_g18997 I 0.912
L898_g21763 Steinernema monticolum L898_g21763 I 0.908
L892_g10843 Steinernema scapterisci L892_g10843 I 0.908
L893_g18993 Steinernema glaseri L893_g18993 I 0.905
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.896
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.886
L898_g12798 Steinernema monticolum L898_g12798 I 0.883
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.880
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.879
L892_g14834 Steinernema scapterisci L892_g14834 N 0.872
L889_g6799 Steinernema feltiae L889_g6799 I 0.870
L889_g6798 Steinernema feltiae L889_g6798 I 0.868
L898_g3515 Steinernema monticolum L898_g3515 I 0.862
CBG16982 Caenorhabditis briggsae CBG16982 I 0.857
L893_g27930 Steinernema glaseri L893_g27930 I 0.857
L898_g19019 Steinernema monticolum L898_g19019 I 0.854
CRE15644 Caenorhabditis remanei CRE15644 I 0.851
CBN23838 Caenorhabditis brenneri CBN23838 I 0.851
L892_g14817 Steinernema scapterisci L892_g14817 I 0.850
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.850
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.849
CBG20729 Caenorhabditis briggsae CBG20729 I 0.848
L889_g6792 Steinernema feltiae L889_g6792 I 0.846
CRE15675 Caenorhabditis remanei CRE15675 I 0.844
L889_g6695 Steinernema feltiae L889_g6695 I 0.844
L889_g6797 Steinernema feltiae L889_g6797 I 0.844
L898_g3514 Steinernema monticolum L898_g3514 I 0.838
L889_g6694 Steinernema feltiae L889_g6694 I 0.838
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.835
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.835
L893_g18992 Steinernema glaseri L893_g18992 I 0.833
SMUV_0000721901 Syphacia muris SMUV_0000721901 I 0.832
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.830
CBG20727 Caenorhabditis briggsae CBG20727 I 0.827
L889_g6692 Steinernema feltiae L889_g6692 I 0.827
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.823
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.821
Minc14668 Meloidogyne incognita Minc14668 I 0.820
L892_g2780 Steinernema scapterisci L892_g2780 I 0.819
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.816
L898_g12799 Steinernema monticolum L898_g12799 I 0.813
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.801
CJA28065 Caenorhabditis japonica CJA28065 I 0.801
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.798
CBG09320 Caenorhabditis briggsae CBG09320 I 0.792
CBN21486 Caenorhabditis brenneri CBN21486 I 0.792
CBN28290 Caenorhabditis brenneri CBN28290 I 0.792
CRE31070 Caenorhabditis remanei CRE31070 I 0.792
L889_g8185 Steinernema feltiae L889_g8185 I 0.791
CBG06599 Caenorhabditis briggsae CBG06599 I 0.790
CBG06609 Caenorhabditis briggsae CBG06609 I 0.790
CRE08749 Caenorhabditis remanei CRE08749 I 0.788
L892_g2781 Steinernema scapterisci L892_g2781 I 0.787
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.786
CBG06601 Caenorhabditis briggsae CBG06601 I 0.785
CBG06611 Caenorhabditis briggsae CBG06611 I 0.785
CRE18430 Caenorhabditis remanei CRE18430 I 0.784
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.784
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.782
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.778
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.775
CBN13569 Caenorhabditis brenneri CBN13569 I 0.774
CJA19466 Caenorhabditis japonica CJA19466 I 0.762
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.760
L596_g14580 Steinernema carpocapsae L596_g14580 N 0.759
CBN13200 Caenorhabditis brenneri CBN13200 I 0.756
CRE15097 Caenorhabditis remanei CRE15097 I 0.756
CRE10693 Caenorhabditis remanei CRE10693 I 0.756
L898_g4013 Steinernema monticolum L898_g4013 I 0.754
CBG06387 Caenorhabditis briggsae CBG06387 I 0.753
SVE_1003800 Strongyloides venezuelensis SVE_1003800 N 0.753
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.747