L596_g14586 (Steinernema carpocapsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L596_g14586 T308941_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.904 0.600
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.865 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g14586.t1 Nuclear receptor 10 80

Links

Other Nuclear receptor family TFs
Other Steinernema carpocapsae TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L898_g12798 Steinernema monticolum L898_g12798 I 0.979
CBG06611 Caenorhabditis briggsae CBG06611 I 0.928
CBG06601 Caenorhabditis briggsae CBG06601 I 0.928
CRE18430 Caenorhabditis remanei CRE18430 I 0.928
L898_g3512 Steinernema monticolum L898_g3512 I 0.927
CBG22870 Caenorhabditis briggsae CBG22870 I 0.917
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.910
L889_g6696 Steinernema feltiae L889_g6696 I 0.908
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.904
CBN28290 Caenorhabditis brenneri CBN28290 I 0.897
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.897
CBN21486 Caenorhabditis brenneri CBN21486 I 0.897
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.893
Minc14668 Meloidogyne incognita Minc14668 I 0.893
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.890
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.890
CBG20727 Caenorhabditis briggsae CBG20727 I 0.885
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.885
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.883
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.882
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.882
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.882
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.882
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.880
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.879
CRE08691 Caenorhabditis remanei CRE08691 I 0.878
L892_g2782 Steinernema scapterisci L892_g2782 I 0.876
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.871
CBG09567 Caenorhabditis briggsae CBG09567 I 0.869
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.868
CBG20729 Caenorhabditis briggsae CBG20729 I 0.867
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.865
CJA28065 Caenorhabditis japonica CJA28065 I 0.865
L892_g14834 Steinernema scapterisci L892_g14834 N 0.865
CRE15644 Caenorhabditis remanei CRE15644 I 0.864
CBN23838 Caenorhabditis brenneri CBN23838 I 0.864
CRE30948 Caenorhabditis remanei CRE30948 I 0.862
L898_g3514 Steinernema monticolum L898_g3514 I 0.861
L889_g6692 Steinernema feltiae L889_g6692 I 0.859
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.853
L892_g2781 Steinernema scapterisci L892_g2781 I 0.852
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.852
CBG09320 Caenorhabditis briggsae CBG09320 I 0.851
CRE31070 Caenorhabditis remanei CRE31070 I 0.851
CRE15675 Caenorhabditis remanei CRE15675 I 0.850
L889_g6695 Steinernema feltiae L889_g6695 I 0.837
L893_g18992 Steinernema glaseri L893_g18992 I 0.832
CBG06599 Caenorhabditis briggsae CBG06599 I 0.830
CBG06609 Caenorhabditis briggsae CBG06609 I 0.830
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.830
CJA09697 Caenorhabditis japonica CJA09697 I 0.826
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.823
CBG06387 Caenorhabditis briggsae CBG06387 I 0.818
L892_g2780 Steinernema scapterisci L892_g2780 I 0.816
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.813
L898_g3515 Steinernema monticolum L898_g3515 I 0.812
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.812
L889_g6694 Steinernema feltiae L889_g6694 I 0.811
CBG14515 Caenorhabditis briggsae CBG14515 I 0.808
nhr-45 Caenorhabditis elegans WBGene00003635 I 0.808
CJA02156 Caenorhabditis japonica CJA02156 I 0.808
CRE00301 Caenorhabditis remanei CRE00301 I 0.808
CBN12210 Caenorhabditis brenneri CBN12210 I 0.808
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.802
L889_g6792 Steinernema feltiae L889_g6792 I 0.784
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.781
maker-nMf.1.1.scaf01765-snap-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01765-snap-gene-0.13 I 0.779
PPA14290 Pristionchus pacificus PPA14290 I 0.779
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.765
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.764
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.760
CRE18699 Caenorhabditis remanei CRE18699 I 0.756
BXY_0690000 Bursaphelenchus xylophilus BXY_0690000 I 0.756
CRE05044 Caenorhabditis remanei CRE05044 I 0.754
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.752
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.750
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.749
L893_g18997 Steinernema glaseri L893_g18997 I 0.745