CBN21486 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN21486 T301818_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.991 0.929
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.871 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN21486 Nuclear receptor 27 97

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN28290 Caenorhabditis brenneri CBN28290 I 0.992
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.991
CRE31070 Caenorhabditis remanei CRE31070 I 0.988
CBG09320 Caenorhabditis briggsae CBG09320 I 0.988
CJA28065 Caenorhabditis japonica CJA28065 I 0.984
CBG06601 Caenorhabditis briggsae CBG06601 I 0.933
CRE18430 Caenorhabditis remanei CRE18430 I 0.933
CBG06611 Caenorhabditis briggsae CBG06611 I 0.933
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.923
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.921
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.916
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.916
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.916
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.916
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.913
CJA09697 Caenorhabditis japonica CJA09697 I 0.913
CBG22870 Caenorhabditis briggsae CBG22870 I 0.911
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.907
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.907
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.903
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.903
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.900
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.897
CRE30948 Caenorhabditis remanei CRE30948 I 0.893
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.893
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.888
CBG09567 Caenorhabditis briggsae CBG09567 I 0.887
CBG20727 Caenorhabditis briggsae CBG20727 I 0.887
CBG15881 Caenorhabditis briggsae CBG15881 I 0.881
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.880
nhr-218 Caenorhabditis elegans WBGene00011750 I 0.875
CRE08691 Caenorhabditis remanei CRE08691 I 0.874
CBG20729 Caenorhabditis briggsae CBG20729 I 0.874
L898_g3512 Steinernema monticolum L898_g3512 I 0.873
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.871
CRE15644 Caenorhabditis remanei CRE15644 I 0.869
CBN23838 Caenorhabditis brenneri CBN23838 I 0.869
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.866
CRE15675 Caenorhabditis remanei CRE15675 I 0.864
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.860
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.859
L898_g19019 Steinernema monticolum L898_g19019 I 0.854
L898_g12798 Steinernema monticolum L898_g12798 I 0.851
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.849
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.844
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.842
CRE05044 Caenorhabditis remanei CRE05044 I 0.834
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.831
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.814
L889_g6798 Steinernema feltiae L889_g6798 I 0.805
L892_g2782 Steinernema scapterisci L892_g2782 I 0.803
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.802
L898_g20180 Steinernema monticolum L898_g20180 I 0.802
L889_g6799 Steinernema feltiae L889_g6799 I 0.802
L892_g10843 Steinernema scapterisci L892_g10843 I 0.801
L889_g6696 Steinernema feltiae L889_g6696 I 0.796
L893_g27930 Steinernema glaseri L893_g27930 I 0.794
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.793
Minc14668 Meloidogyne incognita Minc14668 I 0.793
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.792
L889_g6797 Steinernema feltiae L889_g6797 I 0.792
L889_g6792 Steinernema feltiae L889_g6792 I 0.790
L892_g14825 Steinernema scapterisci L892_g14825 I 0.787
CRE18699 Caenorhabditis remanei CRE18699 I 0.784
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.784
L596_g14537 Steinernema carpocapsae L596_g14537 I 0.778
L892_g14818 Steinernema scapterisci L892_g14818 I 0.775
L596_g14533 Steinernema carpocapsae L596_g14533 I 0.771
L892_g10842 Steinernema scapterisci L892_g10842 I 0.771
L889_g6804 Steinernema feltiae L889_g6804 I 0.764
L898_g4012 Steinernema monticolum L898_g4012 I 0.763
L889_g8187 Steinernema feltiae L889_g8187 I 0.762
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.760
CBN13569 Caenorhabditis brenneri CBN13569 I 0.754
L898_g19021 Steinernema monticolum L898_g19021 I 0.751
L898_g19014 Steinernema monticolum L898_g19014 I 0.745
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.745