CRE05044 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE05044 T302053_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.833 0.514
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.800 0.471
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.769 0.486
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.769 0.486
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE05044 Nuclear receptor 21 91

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG15881 Caenorhabditis briggsae CBG15881 I 0.987
CRE18698 Caenorhabditis remanei CRE18698 I 0.889
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.880
nhr-218 Caenorhabditis elegans WBGene00011750 I 0.879
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.863
nhr-212 Caenorhabditis elegans WBGene00020153 I 0.861
L893_g18993 Steinernema glaseri L893_g18993 I 0.850
CBG06609 Caenorhabditis briggsae CBG06609 I 0.850
CBG06599 Caenorhabditis briggsae CBG06599 I 0.850
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.846
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.843
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.842
L889_g6798 Steinernema feltiae L889_g6798 I 0.839
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.835
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.835
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.835
CRE31070 Caenorhabditis remanei CRE31070 I 0.834
CBN21486 Caenorhabditis brenneri CBN21486 I 0.834
CBN28290 Caenorhabditis brenneri CBN28290 I 0.834
CJA19466 Caenorhabditis japonica CJA19466 I 0.834
CBG09320 Caenorhabditis briggsae CBG09320 I 0.834
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.833
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.833
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.831
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.831
CJA28065 Caenorhabditis japonica CJA28065 I 0.827
L898_g19019 Steinernema monticolum L898_g19019 I 0.824
CBG04928 Caenorhabditis briggsae CBG04928 I 0.824
CRE08755 Caenorhabditis remanei CRE08755 I 0.822
L898_g21763 Steinernema monticolum L898_g21763 I 0.822
CBG06387 Caenorhabditis briggsae CBG06387 I 0.819
L889_g6797 Steinernema feltiae L889_g6797 I 0.812
L889_g6799 Steinernema feltiae L889_g6799 I 0.802
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.800
CBG09567 Caenorhabditis briggsae CBG09567 I 0.795
CRE30948 Caenorhabditis remanei CRE30948 I 0.778
L892_g14817 Steinernema scapterisci L892_g14817 I 0.769
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.769
CRE08753 Caenorhabditis remanei CRE08753 I 0.764
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.762
CRE05778 Caenorhabditis remanei CRE05778 I 0.761
nhr-110 Caenorhabditis elegans WBGene00003700 I 0.759
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.754
CBN13200 Caenorhabditis brenneri CBN13200 I 0.753
L892_g14825 Steinernema scapterisci L892_g14825 I 0.751
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.750
L892_g2782 Steinernema scapterisci L892_g2782 I 0.749
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.747
CRE15097 Caenorhabditis remanei CRE15097 I 0.746
CRE10693 Caenorhabditis remanei CRE10693 I 0.746