nhr-232 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00012494 T306299_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00		 Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.866 0.571
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.812 0.514
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.812 0.514
nhr-84
M02414_2.00 		Caenorhabditis elegans
NRGTCACAAN
NTTGTGACYN		 PBM
Weirauch et al.(2014)
pTH5828 		0.807 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00700_2.00 Nuclear receptor 10 80

DNA Binding Domains

Protein ID Domain From To Sequence
Y22F5A.1 Nuclear receptor 10 80

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG09567 Caenorhabditis briggsae CBG09567 I 0.994
CRE30948 Caenorhabditis remanei CRE30948 I 0.993
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.977
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.956
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.956
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.956
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.955
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.952
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.948
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.948
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.948
L892_g2782 Steinernema scapterisci L892_g2782 I 0.942
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.938
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.930
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.906
L898_g21763 Steinernema monticolum L898_g21763 I 0.901
L898_g3512 Steinernema monticolum L898_g3512 I 0.897
CBG16982 Caenorhabditis briggsae CBG16982 I 0.897
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.893
CBG06599 Caenorhabditis briggsae CBG06599 I 0.889
CBG06609 Caenorhabditis briggsae CBG06609 I 0.889
CBG06611 Caenorhabditis briggsae CBG06611 I 0.887
CBG06601 Caenorhabditis briggsae CBG06601 I 0.887
CRE18430 Caenorhabditis remanei CRE18430 I 0.887
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.886
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.884
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.884
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.884
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.881
CBN21486 Caenorhabditis brenneri CBN21486 I 0.871
CRE31070 Caenorhabditis remanei CRE31070 I 0.871
CBG09320 Caenorhabditis briggsae CBG09320 I 0.871
CBN28290 Caenorhabditis brenneri CBN28290 I 0.871
Minc14668 Meloidogyne incognita Minc14668 I 0.869
L889_g6797 Steinernema feltiae L889_g6797 I 0.869
CJA28065 Caenorhabditis japonica CJA28065 I 0.868
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.867
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.866
CBN13200 Caenorhabditis brenneri CBN13200 I 0.866
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.865
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.864
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.863
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.863
CRE15097 Caenorhabditis remanei CRE15097 I 0.861
CRE10693 Caenorhabditis remanei CRE10693 I 0.861
L893_g18993 Steinernema glaseri L893_g18993 I 0.861
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.860
L889_g6696 Steinernema feltiae L889_g6696 I 0.859
CBG20729 Caenorhabditis briggsae CBG20729 I 0.859
CRE14847 Caenorhabditis remanei CRE14847 I 0.857
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.854
CRE08691 Caenorhabditis remanei CRE08691 I 0.853
L889_g8185 Steinernema feltiae L889_g8185 I 0.852
L898_g4013 Steinernema monticolum L898_g4013 I 0.851
CBG22870 Caenorhabditis briggsae CBG22870 I 0.848
CBG06387 Caenorhabditis briggsae CBG06387 I 0.847
L889_g6692 Steinernema feltiae L889_g6692 I 0.842
CRE15644 Caenorhabditis remanei CRE15644 I 0.842
CBN23838 Caenorhabditis brenneri CBN23838 I 0.842
L898_g12798 Steinernema monticolum L898_g12798 I 0.841
CJA09697 Caenorhabditis japonica CJA09697 I 0.839
L889_g6798 Steinernema feltiae L889_g6798 I 0.836
CBG20727 Caenorhabditis briggsae CBG20727 I 0.835
CBG19141 Caenorhabditis briggsae CBG19141 I 0.834
L893_g18992 Steinernema glaseri L893_g18992 I 0.833
PPA14290 Pristionchus pacificus PPA14290 I 0.831
L892_g2780 Steinernema scapterisci L892_g2780 I 0.830
CBG04928 Caenorhabditis briggsae CBG04928 I 0.829
L898_g3514 Steinernema monticolum L898_g3514 I 0.827
L898_g19019 Steinernema monticolum L898_g19019 I 0.826
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.824
CRE08749 Caenorhabditis remanei CRE08749 I 0.823
CBG04929 Caenorhabditis briggsae CBG04929 I 0.820
CJA19466 Caenorhabditis japonica CJA19466 I 0.818
CRE15675 Caenorhabditis remanei CRE15675 I 0.817
L893_g18997 Steinernema glaseri L893_g18997 I 0.816
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.816
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.815
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.812
L892_g2781 Steinernema scapterisci L892_g2781 I 0.811
L898_g3515 Steinernema monticolum L898_g3515 I 0.809
nhr-84 Caenorhabditis elegans WBGene00003674 D 0.807
CRE08690 Caenorhabditis remanei CRE08690 I 0.805
CBN01168 Caenorhabditis brenneri CBN01168 I 0.805
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.801
CRE05044 Caenorhabditis remanei CRE05044 I 0.800
L889_g6695 Steinernema feltiae L889_g6695 I 0.800
CJA03481 Caenorhabditis japonica CJA03481 I 0.795
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.793
CBG15881 Caenorhabditis briggsae CBG15881 I 0.791
L889_g6694 Steinernema feltiae L889_g6694 I 0.787
L898_g12799 Steinernema monticolum L898_g12799 I 0.784
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.784
L889_g6799 Steinernema feltiae L889_g6799 I 0.783
CBN04849 Caenorhabditis brenneri CBN04849 I 0.782
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.782
L892_g14817 Steinernema scapterisci L892_g14817 I 0.780
maker-nMf.1.1.scaf01765-snap-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01765-snap-gene-0.13 I 0.779
CBN13022 Caenorhabditis brenneri CBN13022 I 0.775
CJA03572 Caenorhabditis japonica CJA03572 I 0.773
nhr-45 Caenorhabditis elegans WBGene00003635 I 0.772
CBG14515 Caenorhabditis briggsae CBG14515 I 0.772
CRE00301 Caenorhabditis remanei CRE00301 I 0.772
CJA02156 Caenorhabditis japonica CJA02156 I 0.772
CBN12210 Caenorhabditis brenneri CBN12210 I 0.772
CBN13569 Caenorhabditis brenneri CBN13569 I 0.769
CRE14848 Caenorhabditis remanei CRE14848 I 0.768
L898_g19012 Steinernema monticolum L898_g19012 I 0.765
L889_g6804 Steinernema feltiae L889_g6804 I 0.760
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.759
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.753
L892_g10843 Steinernema scapterisci L892_g10843 I 0.750