CBG04929 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG04929 T301462_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-216
M00705_2.00 		Caenorhabditis elegans
RRTCAGAAN
NTTCTGAYY		 PBM
Narasimhan et al.(2015)
pTH10811 		0.826 0.522
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.820 0.565
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG04929 Nuclear receptor 1 70

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG04928 Caenorhabditis briggsae CBG04928 I 0.983
CRE13011 Caenorhabditis remanei CRE13011 I 0.982
CRE10693 Caenorhabditis remanei CRE10693 I 0.978
CBN13200 Caenorhabditis brenneri CBN13200 I 0.978
CRE15097 Caenorhabditis remanei CRE15097 I 0.978
CBG19169 Caenorhabditis briggsae CBG19169 I 0.958
nhr-30 Caenorhabditis elegans WBGene00016091 N 0.947
CRE12950 Caenorhabditis remanei CRE12950 I 0.929
CBG16982 Caenorhabditis briggsae CBG16982 I 0.924
CBN00434 Caenorhabditis brenneri CBN00434 I 0.901
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.845
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.834
nhr-216 Caenorhabditis elegans WBGene00020385 D 0.826
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.820
CBG09399 Caenorhabditis briggsae CBG09399 I 0.814
CBG09567 Caenorhabditis briggsae CBG09567 I 0.784
CRE31034 Caenorhabditis remanei CRE31034 I 0.782
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.775
CRE30948 Caenorhabditis remanei CRE30948 I 0.767