CJA09697 (Caenorhabditis japonica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CJA09697 T301957_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.912 0.614
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.839 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA09697 Nuclear receptor 20 92

Links

Other Nuclear receptor family TFs
Other Caenorhabditis japonica TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG22870 Caenorhabditis briggsae CBG22870 I 0.966
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.960
CBG06611 Caenorhabditis briggsae CBG06611 I 0.958
CBG06601 Caenorhabditis briggsae CBG06601 I 0.958
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.957
CRE18430 Caenorhabditis remanei CRE18430 I 0.957
CRE08691 Caenorhabditis remanei CRE08691 I 0.952
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.947
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.933
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.927
CBN28290 Caenorhabditis brenneri CBN28290 I 0.913
CBN21486 Caenorhabditis brenneri CBN21486 I 0.913
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.912
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.910
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.910
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.910
CRE31070 Caenorhabditis remanei CRE31070 I 0.905
CBG09320 Caenorhabditis briggsae CBG09320 I 0.905
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.901
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.895
CJA28065 Caenorhabditis japonica CJA28065 I 0.889
L898_g12798 Steinernema monticolum L898_g12798 I 0.882
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.880
CRE30948 Caenorhabditis remanei CRE30948 I 0.867
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.864
CBG20729 Caenorhabditis briggsae CBG20729 I 0.862
CBN13569 Caenorhabditis brenneri CBN13569 I 0.858
CRE15644 Caenorhabditis remanei CRE15644 I 0.853
CBN23838 Caenorhabditis brenneri CBN23838 I 0.853
CBG20727 Caenorhabditis briggsae CBG20727 I 0.848
CBG09567 Caenorhabditis briggsae CBG09567 I 0.841
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.839
L889_g6696 Steinernema feltiae L889_g6696 I 0.837
CRE15675 Caenorhabditis remanei CRE15675 I 0.836
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.835
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.834
Minc14668 Meloidogyne incognita Minc14668 I 0.833
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.827
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.826
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.826
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.826
L892_g14834 Steinernema scapterisci L892_g14834 N 0.821
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.819
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.807
L898_g3514 Steinernema monticolum L898_g3514 I 0.792
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.790
CBN00434 Caenorhabditis brenneri CBN00434 I 0.783
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.781
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.781
CBG14515 Caenorhabditis briggsae CBG14515 I 0.779
CRE00301 Caenorhabditis remanei CRE00301 I 0.779
CJA02156 Caenorhabditis japonica CJA02156 I 0.779
nhr-45 Caenorhabditis elegans WBGene00003635 I 0.779
CBN12210 Caenorhabditis brenneri CBN12210 I 0.779
L898_g3512 Steinernema monticolum L898_g3512 I 0.776
PPA14290 Pristionchus pacificus PPA14290 I 0.774
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.774
CBG06609 Caenorhabditis briggsae CBG06609 I 0.773
CBG06599 Caenorhabditis briggsae CBG06599 I 0.773
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.771
L892_g2781 Steinernema scapterisci L892_g2781 I 0.768
nhr-218 Caenorhabditis elegans WBGene00011750 I 0.761
L889_g6695 Steinernema feltiae L889_g6695 I 0.760
L892_g2782 Steinernema scapterisci L892_g2782 I 0.760
L889_g6692 Steinernema feltiae L889_g6692 I 0.749