CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA09697
(
Caenorhabditis japonica
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CJA09697
T301957_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-142
M00703_2.00
Caenorhabditis elegans
RGTCACAR
YTGTGACY
PBM
Narasimhan et al.(2015)
pTH10714
0.912
0.614
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN
NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.839
0.571
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA09697
Nuclear receptor
20
92
ATCKICDHIAHGLHFGVLTCRACAAFFRRTVVMERQRKYKCRGGKNNCAVSHIDRYQCRLCRYKKCVELGMTS
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis japonica
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy