CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc14668
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc14668
T307419_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN
NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.869
0.500
nhr-142
M00703_2.00
Caenorhabditis elegans
RGTCACAR
YTGTGACY
PBM
Narasimhan et al.(2015)
pTH10714
0.796
0.514
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc14668
Nuclear receptor
38
107
KLCLICGQMSHGFHFGILACRACAAFFRRTVVENKNYFCRQNGQCPVKKEMRNMCRACRFERCIRLGMNK
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0
I
0.991
MhA1_Contig1192.frz3.gene3
Meloidogyne hapla
MhA1_Contig1192.frz3.gene3
I
0.989
GPLIN_000282900
Globodera pallida
GPLIN_000282900
I
0.978
maker-nMf.1.1.scaf01765-snap-gene-0.13
Meloidogyne floridensis
maker-nMf.1.1.scaf01765-snap-gene-0.13
I
0.976
L898_g12798
Steinernema monticolum
L898_g12798
I
0.924
ACOC_0000492601
Angiostrongylus costaricensis
ACOC_0000492601
I
0.906
SMUV_0000241501
Syphacia muris
SMUV_0000241501
N
0.898
NBR_0001218401
Nippostrongylus brasiliensis
NBR_0001218401
I
0.897
L596_g14586
Steinernema carpocapsae
L596_g14586
I
0.893
ANCCEY_13226
Ancylostoma ceylanicum
ANCCEY_13226
I
0.890
HPLM_0000277901
Haemonchus placei
HPLM_0000277901
I
0.890
HCOI00483700
Haemonchus contortus
HCOI00483700
I
0.890
scaffold31-EXSNAP2012.20
Pristionchus exspectatus
scaffold31-EXSNAP2012.20
I
0.887
L889_g6696
Steinernema feltiae
L889_g6696
I
0.887
L892_g14834
Steinernema scapterisci
L892_g14834
N
0.876
BXY_1091100
Bursaphelenchus xylophilus
BXY_1091100
N
0.875
BXY_0690000
Bursaphelenchus xylophilus
BXY_0690000
I
0.874
nhr-232
Caenorhabditis elegans
WBGene00012494
D
0.869
CRE30948
Caenorhabditis remanei
CRE30948
I
0.866
SVUK_0002058501
Strongylus vulgaris
SVUK_0002058501
I
0.864
L892_g8137
Steinernema scapterisci
L892_g8137
N
0.864
L898_g3512
Steinernema monticolum
L898_g3512
I
0.848
nhr-213
Caenorhabditis elegans
WBGene00011520
I
0.847
NBR_0001834701
Nippostrongylus brasiliensis
NBR_0001834701
I
0.845
nhr-102
Caenorhabditis elegans
WBGene00003692
I
0.842
CRE08691
Caenorhabditis remanei
CRE08691
I
0.842
CBG09567
Caenorhabditis briggsae
CBG09567
I
0.839
CJA09697
Caenorhabditis japonica
CJA09697
I
0.833
CRE15675
Caenorhabditis remanei
CRE15675
I
0.827
L893_g9516
Steinernema glaseri
L893_g9516
N
0.827
L892_g2782
Steinernema scapterisci
L892_g2782
I
0.826
CBN13569
Caenorhabditis brenneri
CBN13569
I
0.826
SMUV_0000241401
Syphacia muris
SMUV_0000241401
I
0.824
CBG20729
Caenorhabditis briggsae
CBG20729
I
0.824
nhr-178
Caenorhabditis elegans
WBGene00017510
I
0.820
L596_g14588
Steinernema carpocapsae
L596_g14588
I
0.820
EVEC_0000956701
Enterobius vermicularis
EVEC_0000956701
I
0.814
PPA14290
Pristionchus pacificus
PPA14290
I
0.814
CJA28065
Caenorhabditis japonica
CJA28065
I
0.811
CRE15644
Caenorhabditis remanei
CRE15644
I
0.811
CBN23838
Caenorhabditis brenneri
CBN23838
I
0.811
CBG22870
Caenorhabditis briggsae
CBG22870
I
0.808
CBG06611
Caenorhabditis briggsae
CBG06611
I
0.801
CBG06601
Caenorhabditis briggsae
CBG06601
I
0.801
CRE18430
Caenorhabditis remanei
CRE18430
I
0.800
nhr-142
Caenorhabditis elegans
WBGene00018430
D
0.796
CBG09320
Caenorhabditis briggsae
CBG09320
I
0.793
CBN28290
Caenorhabditis brenneri
CBN28290
I
0.793
CBN21486
Caenorhabditis brenneri
CBN21486
I
0.793
CRE31070
Caenorhabditis remanei
CRE31070
I
0.793
nhr-231
Caenorhabditis elegans
WBGene00012449
I
0.793
nhr-53
Caenorhabditis elegans
WBGene00003643
I
0.791
CBG20727
Caenorhabditis briggsae
CBG20727
I
0.788
CRE09011
Caenorhabditis remanei
CRE09011
I
0.787
SVUK_0001603001
Strongylus vulgaris
SVUK_0001603001
I
0.784
nhr-170
Caenorhabditis elegans
WBGene00008309
I
0.784
nhr-54
Caenorhabditis elegans
WBGene00003644
I
0.775
L893_g18997
Steinernema glaseri
L893_g18997
I
0.773
CRE27865
Caenorhabditis remanei
CRE27865
N
0.773
PEQ_0000560101
Parascaris equorum
PEQ_0000560101
I
0.766
GPLIN_001629700
Globodera pallida
GPLIN_001629700
N
0.765
NBR_0001834801
Nippostrongylus brasiliensis
NBR_0001834801
I
0.755
HPBE_0001646201
Heligmosomoides bakeri
HPBE_0001646201
I
0.752
ANCCEY_07914
Ancylostoma ceylanicum
ANCCEY_07914
I
0.749