nhr-178 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00017510 T306338_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.888 0.586
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.884 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
F16B4.9 Nuclear receptor 22 94

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE18430 Caenorhabditis remanei CRE18430 I 0.986
CBG06611 Caenorhabditis briggsae CBG06611 I 0.985
CBG06601 Caenorhabditis briggsae CBG06601 I 0.985
CRE08691 Caenorhabditis remanei CRE08691 I 0.984
CBG22870 Caenorhabditis briggsae CBG22870 I 0.978
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.972
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.972
CJA09697 Caenorhabditis japonica CJA09697 I 0.947
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.935
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.930
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.930
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.930
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.929
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.924
CJA28065 Caenorhabditis japonica CJA28065 I 0.923
CBG09320 Caenorhabditis briggsae CBG09320 I 0.920
CRE31070 Caenorhabditis remanei CRE31070 I 0.920
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.897
CBN28290 Caenorhabditis brenneri CBN28290 I 0.893
CBN21486 Caenorhabditis brenneri CBN21486 I 0.893
CRE30948 Caenorhabditis remanei CRE30948 I 0.892
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.891
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.888
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.884
CBG09567 Caenorhabditis briggsae CBG09567 I 0.875
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.869
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.864
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.863
L898_g12798 Steinernema monticolum L898_g12798 I 0.850
CBG20727 Caenorhabditis briggsae CBG20727 I 0.850
L898_g3514 Steinernema monticolum L898_g3514 I 0.848
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.839
CBG20729 Caenorhabditis briggsae CBG20729 I 0.839
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.833
CBN23838 Caenorhabditis brenneri CBN23838 I 0.832
CRE15644 Caenorhabditis remanei CRE15644 I 0.832
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.829
CRE00301 Caenorhabditis remanei CRE00301 I 0.828
CBG14515 Caenorhabditis briggsae CBG14515 I 0.828
nhr-45 Caenorhabditis elegans WBGene00003635 I 0.828
CBN12210 Caenorhabditis brenneri CBN12210 I 0.828
CJA02156 Caenorhabditis japonica CJA02156 I 0.828
Minc14668 Meloidogyne incognita Minc14668 I 0.820
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.818
L889_g6692 Steinernema feltiae L889_g6692 I 0.818
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.814
CRE15675 Caenorhabditis remanei CRE15675 I 0.810
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.809
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.803
L898_g3512 Steinernema monticolum L898_g3512 I 0.799
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.789
L889_g6695 Steinernema feltiae L889_g6695 I 0.787
L892_g2782 Steinernema scapterisci L892_g2782 I 0.783
L889_g6694 Steinernema feltiae L889_g6694 I 0.783
L893_g18992 Steinernema glaseri L893_g18992 I 0.777
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.777
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.775
L892_g2781 Steinernema scapterisci L892_g2781 I 0.775
L898_g3515 Steinernema monticolum L898_g3515 I 0.774
CBG06599 Caenorhabditis briggsae CBG06599 I 0.770
CBG06609 Caenorhabditis briggsae CBG06609 I 0.770
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.769
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.767
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.767
L892_g2780 Steinernema scapterisci L892_g2780 I 0.760
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.760
PPA14290 Pristionchus pacificus PPA14290 I 0.759
L892_g14834 Steinernema scapterisci L892_g14834 N 0.757
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.756
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.753
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.753
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.750
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.749