CBG27350 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG27350 T301644_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.784 0.559
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.784 0.559
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG27350 Nuclear receptor 13 81

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE18699 Caenorhabditis remanei CRE18699 I 0.884
CBG06387 Caenorhabditis briggsae CBG06387 I 0.869
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.859
CJA19466 Caenorhabditis japonica CJA19466 I 0.840
ASU_09680 Ascaris suum ASU_09680 N 0.813
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.805
CBG06599 Caenorhabditis briggsae CBG06599 I 0.799
CBG06609 Caenorhabditis briggsae CBG06609 I 0.799
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.798
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.784
CRE18698 Caenorhabditis remanei CRE18698 I 0.754
nhr-212 Caenorhabditis elegans WBGene00020153 I 0.754
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.748