CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG14996
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG14996
T301543_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-34
M00690_2.00
Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN
PBM
Narasimhan et al.(2015)
pTH9907
0.966
0.686
NR2E3
M00371_2.00
Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN
PBM
Barrera et al.(2016)
NR2E3_R76W
0.786
0.514
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG14996
Nuclear receptor
20
89
QFCLVCGDEKAGRHYGTVACNGCKGFFRRSVWDHRTYSCTMGNNCDVSQVYRNRCRACRLQKCYSVGMDE
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
142 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy