DAPPUDRAFT_106791 (Daphnia pulex)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 DAPPUDRAFT_106791 T302323_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.982 0.857
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.982 0.857
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.982 0.857
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.982 0.843
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.982 0.900
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.982 0.886
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.980 0.843
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.976 0.843
NR2E3
M00369_2.00 		Homo sapiens
NGGGRTCAHN
NDTGAYCCCN		 PBM
Barrera et al.(2016)
NR2E3_G56R 		0.972 0.843
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX76568 Nuclear receptor 22 92

Links

Other Nuclear receptor family TFs
Other Daphnia pulex TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000015842 Xiphophorus maculatus ENSXMAG00000015842 I 0.986
nr2e3 Oryzias latipes ENSORLG00000007175 I 0.986
ENSPFOG00000006516 Poecilia formosa ENSPFOG00000006516 I 0.986
NR2E3 Monodelphis domestica ENSMODG00000001949 I 0.985
ENSMEUG00000016597 Macropus eugenii ENSMEUG00000016597 I 0.985
nr2e3 Xenopus tropicalis XB-GENE-485801 I 0.985
GF13031 Drosophila ananassae FBgn0090064 I 0.982
Hr51 Drosophila melanogaster FBgn0034012 D 0.982
ENSXMAG00000010311 Xiphophorus maculatus ENSXMAG00000010311 I 0.982
GH20426 Drosophila grimshawi FBgn0127889 I 0.982
GJ14974 Drosophila virilis FBgn0202177 I 0.982
GD11109 Drosophila simulans FBgn0182865 I 0.982
GL17752 Drosophila persimilis FBgn0155355 I 0.982
GI19610 Drosophila mojavensis FBgn0142347 I 0.982
NR2E3 Tursiops truncatus ENSTTRG00000009410 I 0.982
NR2E3 Pteropus vampyrus ENSPVAG00000009088 I 0.982
NR2E3 Procavia capensis ENSPCAG00000014733 I 0.982
ENSPANG00000016257 Papio anubis ENSPANG00000016257 I 0.982
NR2E3 Oryzias latipes ENSORLG00000000011 I 0.982
NR2E3 Ochotona princeps ENSOPRG00000006427 I 0.982
ENSPFOG00000006106 Poecilia formosa ENSPFOG00000006106 I 0.982
NR2E3 Pan troglodytes ENSPTRG00000007242 I 0.982
ENSSTOG00000012080 Ictidomys tridecemlineatus ENSSTOG00000012080 I 0.982
Nr2e3 Rattus norvegicus ENSRNOG00000050690 I 0.982
GE13645 Drosophila yakuba FBgn0231304 I 0.982
NR2E3 Takifugu rubripes ENSTRUG00000015582 I 0.982
GB49738 Apis mellifera GB49738 I 0.982
AALB001133 Anopheles albimanus AALB001133 I 0.982
AARA003887 Anopheles arabiensis AARA003887 I 0.982
LDEC022044 Leptinotarsa decemlineata LDEC022044 I 0.982
e_gw.324.28.1 Branchiostoma floridae e_gw.324.28.1 I 0.982
e_gw.107.44.1 Branchiostoma floridae e_gw.107.44.1 I 0.982
AATE003142 Anopheles atroparvus AATE003142 I 0.982
ACOM026748 Anopheles coluzzii ACOM026748 I 0.982
MDOA010244 Musca domestica MDOA010244 I 0.982
AMEM000983 Anopheles merus AMEM000983 I 0.982
AFAF011447 Anopheles farauti AFAF011447 I 0.982
AEPI011067 Anopheles epiroticus AEPI011067 I 0.982
Pvit_13689 Pogona vitticeps Pvit_13689 I 0.982
Ogr12843 Ophisaurus gracilis Ogr12843 I 0.982
PHUM039420 Pediculus humanus PHUM039420 I 0.982
RPRC002557 Rhodnius prolixus RPRC002557 I 0.982
NV14480 Nasonia vitripennis NV14480 I 0.982
LotgiG137595 Lottia gigantea LotgiG137595 I 0.982
ENSONIG00000015396 Oreochromis niloticus ENSONIG00000015396 I 0.982
TC009378 Tribolium castaneum TC009378 I 0.982
Alligator_sinensis_CCG020979.1 Alligator sinensis Alligator_sinensis_CCG020979.1 I 0.982
Myotis_brandtii_NR2E3_10027281 Myotis brandtii Myotis_brandtii_NR2E3_10027281 I 0.982
Hsal_07902--XP_396999.3_APIME Harpegnathos saltator Hsal_07902--XP_396999.3_APIME I 0.982
ENSBTAP00000048604-D1 Bos grunniens ENSBTAP00000048604-D1 I 0.982
Cmyd_10012017 Chelonia mydas Cmyd_10012017 I 0.982
GA30480 Drosophila pseudoobscura FBgn0264774 D 0.982
GK20892 Drosophila willistoni FBgn0222886 I 0.982
NR2E3 Homo sapiens ENSG00000278570 D 0.982
NR2E3 Felis catus ENSFCAG00000031082 I 0.982
NR2E3 Gasterosteus aculeatus ENSGACG00000017060 I 0.982
CGI_10007932 Crassostrea gigas CGI_10007932 I 0.982
ACYPI007601 Acyrthosiphon pisum ACYPI007601 I 0.982
ADAC006988 Anopheles darlingi ADAC006988 I 0.982
NR2E3 Equus caballus ENSECAG00000015192 I 0.982
ENSCSAG00000013721 Chlorocebus sabaeus ENSCSAG00000013721 I 0.982
ENSONIG00000007109 Oreochromis niloticus ENSONIG00000007109 I 0.982
NR2E3 Anolis carolinensis ENSACAG00000011910 I 0.982
NR2E3 Bos taurus ENSBTAG00000014236 I 0.982
NR2E3 Callithrix jacchus ENSCJAG00000018552 I 0.982
NR2E3 Cavia porcellus ENSCPOG00000008974 I 0.982
AAEL007190 Aedes aegypti AAEL007190 I 0.982
NR2E3 Gorilla gorilla ENSGGOG00000004383 I 0.982
ENSNLEG00000013807 Nomascus leucogenys ENSNLEG00000013807 I 0.982
Nr2e3 Mus musculus ENSMUSG00000032292 D 0.982
ENSMPUG00000017103 Mustela putorius furo ENSMPUG00000017103 I 0.982
NR2E3 Myotis lucifugus ENSMLUG00000008408 I 0.982
ENSOARG00000018808 Ovis aries ENSOARG00000018808 I 0.982
ENSLOCG00000014973 Lepisosteus oculatus ENSLOCG00000014973 I 0.982
ENSGMOG00000019194 Gadus morhua ENSGMOG00000019194 I 0.982
NR2E3 Macaca mulatta ENSMMUG00000019276 I 0.982
NR2E3 Otolemur garnettii ENSOGAG00000006128 I 0.982
ENSLACG00000022378 Latimeria chalumnae ENSLACG00000022378 I 0.982
ENSAMXG00000017872 Astyanax mexicanus ENSAMXG00000017872 I 0.981
nr2e3 Danio rerio ENSDARG00000045904 I 0.981
nr2e3 Gasterosteus aculeatus ENSGACG00000004739 I 0.981
NR2E3 Sus scrofa ENSSSCG00000004978 I 0.981
NR2E3 Tupaia belangeri ENSTBEG00000011672 I 0.981
HelroG139475 Helobdella robusta HelroG139475 I 0.980
EFV56045 Trichinella spiralis EFV56045 I 0.980
L798_02234 Zootermopsis nevadensis L798_02234 I 0.980
D917_05007 Trichinella nativa D917_05007 I 0.980
Aan_R004022 Calypte anna Aan_R004022 I 0.979
Afo_R007066 Aptenodytes forsteri Afo_R007066 I 0.979
Gfo_R008863 Geospiza fortis Gfo_R008863 I 0.979
BGLB004019 Biomphalaria glabrata BGLB004019 I 0.979
tetur01g11040 Tetranychus urticae tetur01g11040 I 0.979
ENSFALG00000009699 Ficedula albicollis ENSFALG00000009699 I 0.979
ENSGMOG00000008342 Gadus morhua ENSGMOG00000008342 I 0.979
NR2E3 Gallus gallus ENSGALG00000002093 I 0.979
ENSTGUG00000004498 Taeniopygia guttata ENSTGUG00000004498 I 0.979
TTRE_0000600201 Trichuris trichiura TTRE_0000600201 I 0.978
CapteG171557 Capitella teleta CapteG171557 I 0.978
D918_07443 Trichuris suis D918_07443 I 0.978
SMU15029049 Schmidtea mediterranea SMU15029049 I 0.976
SMU15038222 Schmidtea mediterranea SMU15038222 I 0.976
Hba_15323 Heterorhabditis bacteriophora Hba_15323 I 0.975
CBN22518 Caenorhabditis brenneri CBN22518 I 0.975
CBG14155 Caenorhabditis briggsae CBG14155 I 0.975
SVE_0933400 Strongyloides venezuelensis SVE_0933400 I 0.975
CJA07370 Caenorhabditis japonica CJA07370 I 0.975
HCOI01781300 Haemonchus contortus HCOI01781300 I 0.975
nOo.2.0.1.g01040 Onchocerca ochengi nOo.2.0.1.g01040 I 0.975
TCLT_0000456401 Thelazia callipaeda TCLT_0000456401 I 0.975
LOAG_06205 Loa loa LOAG_06205 I 0.975
MhA1_Contig1792.frz3.gene6 Meloidogyne hapla MhA1_Contig1792.frz3.gene6 I 0.975
Bm4485 Brugia malayi Bm4485 I 0.975
TCNE_0001716001 Toxocara canis TCNE_0001716001 I 0.975
genemark-nMf.1.1.scaf00188-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00188-processed-gene-0.4 I 0.975
nDi.2.2.2.g10236 Dirofilaria immitis nDi.2.2.2.g10236 I 0.975
nLs.2.1.2.g01701 Litomosoides sigmodontis nLs.2.1.2.g01701 I 0.975
TRE_0000223201 Trichobilharzia regenti TRE_0000223201 I 0.975
nAv.1.0.1.g01891 Acanthocheilonema viteae nAv.1.0.1.g01891 I 0.975
SSTP_0000090600 Strongyloides stercoralis SSTP_0000090600 I 0.975
ANCCEY_01724 Ancylostoma ceylanicum ANCCEY_01724 I 0.975
CRE00427 Caenorhabditis remanei CRE00427 I 0.975
ECPE_0000243601 Echinostoma caproni ECPE_0000243601 I 0.975
OFLC_0000991001 Onchocerca flexuosa OFLC_0000991001 I 0.975
DICVIV_11193 Dictyocaulus viviparus DICVIV_11193 I 0.975
ANCCAN_05510 Ancylostoma caninum ANCCAN_05510 I 0.975
CGOC_0000187501 Cylicostephanus goldi CGOC_0000187501 I 0.975
BTMF_0001091401 Brugia timori BTMF_0001091401 I 0.975
scaffold296-EXSNAP2012.8 Pristionchus exspectatus scaffold296-EXSNAP2012.8 I 0.975
BXY_0327700 Bursaphelenchus xylophilus BXY_0327700 I 0.975
SPAL_0001117000 Strongyloides papillosus SPAL_0001117000 I 0.975
nOo.2.0.1.g10097 Onchocerca ochengi nOo.2.0.1.g10097 I 0.975
ASU_07884 Ascaris suum ASU_07884 I 0.975
nOo.2.0.1.g11611 Onchocerca ochengi nOo.2.0.1.g11611 I 0.975
fax-1 Caenorhabditis elegans WBGene00001400 I 0.975
WBGene00240517 Onchocerca volvulus WBGene00240517 I 0.975
Ppa-fax-1 Pristionchus pacificus PPA00264 I 0.975
SPU_014405 Strongylocentrotus purpuratus SPU_014405 I 0.974
SMTD_0001566201 Schistosoma mattheei SMTD_0001566201 I 0.974
SMRZ_0000841101 Schistosoma margrebowiei SMRZ_0000841101 I 0.974
Smp_167770 Schistosoma mansoni Smp_167770 I 0.974
csin100859 Clonorchis sinensis csin100859 I 0.973
RSKR_0000698500 Rhabditophanes kr3021 RSKR_0000698500 I 0.973
GPLIN_000669800 Globodera pallida GPLIN_000669800 I 0.973
Sakowv30007027m.g Saccoglossus kowalevskii Sakowv30007027m.g I 0.972
L898_g15355 Steinernema monticolum L898_g15355 I 0.972
SBAD_0000006401 Soboliphyme baturini SBAD_0000006401 I 0.972
PTRK_0000446300 Parastrongyloides trichosuri PTRK_0000446300 I 0.972
L893_g28297 Steinernema glaseri L893_g28297 I 0.972
L892_g9366 Steinernema scapterisci L892_g9366 I 0.972
L596_g2163 Steinernema carpocapsae L596_g2163 I 0.972
L889_g11978 Steinernema feltiae L889_g11978 I 0.972
SMUV_0000245701 Syphacia muris SMUV_0000245701 I 0.970
ENSPMAG00000009792 Petromyzon marinus ENSPMAG00000009792 I 0.969
EVEC_0000564801 Enterobius vermicularis EVEC_0000564801 I 0.967
ENSAMEG00000008835 Ailuropoda melanoleuca ENSAMEG00000008835 I 0.960
NR2E3 Tetraodon nigroviridis ENSTNIG00000005150 I 0.955
SMAR005628 Strigamia maritima SMAR005628 I 0.931
snap_masked-nMf.1.1.scaf29070-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf29070-processed-gene-0.1 I 0.928
TELCIR_21617 Teladorsagia circumcincta TELCIR_21617 I 0.833
WUBG_05086 Wuchereria bancrofti WUBG_05086 I 0.833
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.823
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.823
OESDEN_00114 Oesophagostomum dentatum OESDEN_00114 I 0.806
ISCW019467 Ixodes scapularis ISCW019467 I 0.801
SMAR006008 Strigamia maritima SMAR006008 I 0.799
BXY_0039800 Bursaphelenchus xylophilus BXY_0039800 I 0.791
PHUM331460 Pediculus humanus PHUM331460 I 0.784
tetur08g01210 Tetranychus urticae tetur08g01210 I 0.782
NR2E3 Meleagris gallopavo ENSMGAG00000001449 I 0.781
HHAL007294-PA Halyomorpha halys HHAL007294-PA I 0.781
ISCW010891 Ixodes scapularis ISCW010891 I 0.778
RPRC007025 Rhodnius prolixus RPRC007025 I 0.773
CGI_10028920 Crassostrea gigas CGI_10028920 I 0.771
LotgiG130367 Lottia gigantea LotgiG130367 I 0.771
ALUE_0000009401 Ascaris lumbricoides ALUE_0000009401 I 0.768
D917_09121 Trichinella nativa D917_09121 I 0.767
EFV59616 Trichinella spiralis EFV59616 I 0.767
DAPPUDRAFT_299738 Daphnia pulex DAPPUDRAFT_299738 I 0.766
KGM_21528 Danaus plexippus KGM_21528 I 0.762
BGIBMGA002000 Bombyx mori BGIBMGA002000 I 0.761
HMEL012854 Heliconius melpomene HMEL012854 I 0.761
CapteG226190 Capitella teleta CapteG226190 I 0.757
CPIJ012467 Culex quinquefasciatus CPIJ012467 I 0.755
AAEL003020 Aedes aegypti AAEL003020 I 0.755
ADAC006907 Anopheles darlingi ADAC006907 I 0.755
CpipJ_CPIJ012467 Culex pipiens CpipJ_CPIJ012467 I 0.755
AALB003284 Anopheles albimanus AALB003284 I 0.755
AMEC019536 Anopheles melas AMEC019536 I 0.755
AMAM000431 Anopheles maculatus AMAM000431 I 0.755
AMEM005434 Anopheles merus AMEM005434 I 0.755
AMIN005547 Anopheles minimus AMIN005547 I 0.755
ASTEI01071 Anopheles stephensi ASTEI01071 I 0.755
AQUA002816 Anopheles quadriannulatus AQUA002816 I 0.755
AGAP000819 Anopheles gambiae AGAP000819 I 0.755
AFUN007550 Anopheles funestus AFUN007550 I 0.755
AARA002508 Anopheles arabiensis AARA002508 I 0.755
AFAF018214 Anopheles farauti AFAF018214 I 0.755
ACOM036097 Anopheles coluzzii ACOM036097 I 0.755
ACUA015273 Anopheles culicifacies ACUA015273 I 0.755
AEPI011017 Anopheles epiroticus AEPI011017 I 0.755
AATE006814 Anopheles atroparvus AATE006814 I 0.754
ASIS014807 Anopheles sinensis ASIS014807 I 0.754
SMU15015045 Schmidtea mediterranea SMU15015045 I 0.751
YQE_11038 Dendroctonus ponderosae YQE_11038 I 0.749
ADIR001527 Anopheles dirus ADIR001527 I 0.748
Hsal_06558--XP_001121187.1_APIME Harpegnathos saltator Hsal_06558--XP_001121187.1_APIME I 0.746
Cflo_06716--XP_001121187.1_APIME Camponotus floridanus Cflo_06716--XP_001121187.1_APIME I 0.746
GB50436 Apis mellifera GB50436 I 0.745