CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG016206.1
(
Alligator sinensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Alligator_sinensis_CCG016206.1
T306542_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG016206.1
Nuclear receptor
45
114
RTCLICGDRATGLHYGIISCEGCKGFFKRSICNRRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNR
Alligator_sinensis_CCG016206.1
Nuclear receptor
507
564
RSHRARESGAIQGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPYCRFQKCLSVGMRL
Links
Other
Nuclear receptor
family TFs
Other
Alligator sinensis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ogr13888
Ophisaurus gracilis
Ogr13888
N
0.909
ENSAMXG00000005494
Astyanax mexicanus
ENSAMXG00000005494
N
0.787