csin100859 (Clonorchis sinensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 csin100859 T308373_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GA30480
M02409_2.00
Drosophila pseudoobscura
RAGATCAM

KTGATCTY
PBM
Weirauch et al.(2014)
pTH5877
0.977 0.871
Hr51
M06432_2.00
Drosophila melanogaster
AMRDATCARARGW

WCYTYTGATHYKT
B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012
0.977 0.871
NR2E3
M00373_2.00
Homo sapiens
NRAGATCAMN

NKTGATCTYN
PBM
Barrera et al.(2016)
NR2E3_REF
0.963 0.800
Nr2e3
M02708_2.00
Mus musculus
AAGCTTD

HAAGCTT
SELEX
Mathelier et al.(2014)
MA0164.1
0.963 0.800
Nr2e3
M09328_2.00
Mus musculus
NAAGTCAAAARKCA

TGMYTTTTGACTTN
Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C
0.963 0.800
NR2E3
M00372_2.00
Homo sapiens
AAAGATCA

TGATCTTT
PBM
Barrera et al.(2016)
NR2E3_R77Q
0.963 0.786
NR2E3
M00370_2.00
Homo sapiens
NNNWRABATCANN

NNTGATVTYWNNN
PBM
Barrera et al.(2016)
NR2E3_R76Q
0.957 0.786
NR2E3
M00371_2.00
Homo sapiens
NNNHAATWTRTNN

NNAYAWATTDNNN
PBM
Barrera et al.(2016)
NR2E3_R76W
0.951 0.786
NR2E3
M00369_2.00
Homo sapiens
NGGGRTCAHN

NDTGAYCCCN
PBM
Barrera et al.(2016)
NR2E3_G56R
0.943 0.786
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
csin100859 Nuclear receptor 268 338

Links

Other Nuclear receptor family TFs
Other Clonorchis sinensis TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GA30480 Drosophila pseudoobscura FBgn0264774 D 0.977
Hr51 Drosophila melanogaster FBgn0034012 D 0.977
Nr2e3 Mus musculus ENSMUSG00000032292 D 0.963
NR2E3 Homo sapiens ENSG00000278570 D 0.963
BTMF_0001091401 Brugia timori BTMF_0001091401 I 0.985
AALB001133 Anopheles albimanus AALB001133 I 0.977
nr2e3 Xenopus tropicalis XB-GENE-485801 I 0.975
SMU15038222 Schmidtea mediterranea SMU15038222 I 0.985
SMU15029049 Schmidtea mediterranea SMU15029049 I 0.985
LDEC022044 Leptinotarsa decemlineata LDEC022044 I 0.977
AARA003887 Anopheles arabiensis AARA003887 I 0.977
AATE003142 Anopheles atroparvus AATE003142 I 0.977
ACOM026748 Anopheles coluzzii ACOM026748 I 0.977
ASU_07884 Ascaris suum ASU_07884 I 0.985
ANCCEY_01724 Ancylostoma ceylanicum ANCCEY_01724 I 0.985
ANCCAN_05510 Ancylostoma caninum ANCCAN_05510 I 0.985
MDOA010244 Musca domestica MDOA010244 I 0.977
BGLB004019 Biomphalaria glabrata BGLB004019 I 0.980
AMEM000983 Anopheles merus AMEM000983 I 0.977
AFAF011447 Anopheles farauti AFAF011447 I 0.977
AEPI011067 Anopheles epiroticus AEPI011067 I 0.977
Sakowv30007027m.g Saccoglossus kowalevskii Sakowv30007027m.g I 0.987
e_gw.324.28.1 Branchiostoma floridae e_gw.324.28.1 I 0.978
e_gw.107.44.1 Branchiostoma floridae e_gw.107.44.1 I 0.978
WBGene00240517 Onchocerca volvulus WBGene00240517 I 0.985
fax-1 Caenorhabditis elegans WBGene00001400 I 0.985
tetur01g11040 Tetranychus urticae tetur01g11040 I 0.974
TC009378 Tribolium castaneum TC009378 I 0.977
SPU_014405 Strongylocentrotus purpuratus SPU_014405 I 0.983
Smp_167770 Schistosoma mansoni Smp_167770 I 0.983
SMAR005628 Strigamia maritima SMAR005628 I 0.916
RPRC002557 Rhodnius prolixus RPRC002557 I 0.977
Aan_R004022 Calypte anna Aan_R004022 I 0.980
Pvit_13689 Pogona vitticeps Pvit_13689 I 0.977
Ogr12843 Ophisaurus gracilis Ogr12843 I 0.977
Myotis_brandtii_NR2E3_10027281 Myotis brandtii Myotis_brandtii_NR2E3_10027281 I 0.963
Hsal_07902--XP_396999.3_APIME Harpegnathos saltator Hsal_07902--XP_396999.3_APIME I 0.977
Gfo_R008863 Geospiza fortis Gfo_R008863 I 0.980
ENSBTAP00000048604-D1 Bos grunniens ENSBTAP00000048604-D1 I 0.963
Cmyd_10012017 Chelonia mydas Cmyd_10012017 I 0.977
Alligator_sinensis_CCG020979.1 Alligator sinensis Alligator_sinensis_CCG020979.1 I 0.977
Afo_R007066 Aptenodytes forsteri Afo_R007066 I 0.980
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.769
BXY_0327700 Bursaphelenchus xylophilus BXY_0327700 I 0.985
TTRE_0000600201 Trichuris trichiura TTRE_0000600201 I 0.978
SMRZ_0000841101 Schistosoma margrebowiei SMRZ_0000841101 I 0.983
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.769
scaffold296-EXSNAP2012.8 Pristionchus exspectatus scaffold296-EXSNAP2012.8 I 0.983
SBAD_0000006401 Soboliphyme baturini SBAD_0000006401 I 0.983
RSKR_0000698500 Rhabditophanes kr3021 RSKR_0000698500 I 0.984
PTRK_0000446300 Parastrongyloides trichosuri PTRK_0000446300 I 0.983
OFLC_0000991001 Onchocerca flexuosa OFLC_0000991001 I 0.985
OESDEN_00114 Oesophagostomum dentatum OESDEN_00114 I 0.864
SMTD_0001566201 Schistosoma mattheei SMTD_0001566201 I 0.983
SMUV_0000245701 Syphacia muris SMUV_0000245701 I 0.980
TRE_0000223201 Trichobilharzia regenti TRE_0000223201 I 0.984
TELCIR_21617 Teladorsagia circumcincta TELCIR_21617 I 0.817
TCNE_0001716001 Toxocara canis TCNE_0001716001 I 0.985
TCLT_0000456401 Thelazia callipaeda TCLT_0000456401 I 0.983
SVE_0933400 Strongyloides venezuelensis SVE_0933400 I 0.985
SSTP_0000090600 Strongyloides stercoralis SSTP_0000090600 I 0.985
SPAL_0001117000 Strongyloides papillosus SPAL_0001117000 I 0.985
snap_masked-nMf.1.1.scaf29070-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf29070-processed-gene-0.1 I 0.920
nOo.2.0.1.g11611 Onchocerca ochengi nOo.2.0.1.g11611 I 0.985
nOo.2.0.1.g10097 Onchocerca ochengi nOo.2.0.1.g10097 I 0.985
nOo.2.0.1.g01040 Onchocerca ochengi nOo.2.0.1.g01040 I 0.985
Hba_15323 Heterorhabditis bacteriophora Hba_15323 I 0.985
GPLIN_000669800 Globodera pallida GPLIN_000669800 I 0.984
genemark-nMf.1.1.scaf00188-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00188-processed-gene-0.4 I 0.983
EVEC_0000564801 Enterobius vermicularis EVEC_0000564801 I 0.978
ECPE_0000243601 Echinostoma caproni ECPE_0000243601 I 0.985
DICVIV_11193 Dictyocaulus viviparus DICVIV_11193 I 0.985
D918_07443 Trichuris suis D918_07443 I 0.978
D917_05007 Trichinella nativa D917_05007 I 0.975
HCOI01781300 Haemonchus contortus HCOI01781300 I 0.985
L596_g2163 Steinernema carpocapsae L596_g2163 I 0.983
nLs.2.1.2.g01701 Litomosoides sigmodontis nLs.2.1.2.g01701 I 0.985
nDi.2.2.2.g10236 Dirofilaria immitis nDi.2.2.2.g10236 I 0.983
nAv.1.0.1.g01891 Acanthocheilonema viteae nAv.1.0.1.g01891 I 0.983
MhA1_Contig1792.frz3.gene6 Meloidogyne hapla MhA1_Contig1792.frz3.gene6 I 0.983
L898_g15355 Steinernema monticolum L898_g15355 I 0.983
L893_g28297 Steinernema glaseri L893_g28297 I 0.983
L892_g9366 Steinernema scapterisci L892_g9366 I 0.983
L889_g11978 Steinernema feltiae L889_g11978 I 0.983
CGOC_0000187501 Cylicostephanus goldi CGOC_0000187501 I 0.985
Ppa-fax-1 Pristionchus pacificus PPA00264 I 0.983
WUBG_05086 Wuchereria bancrofti WUBG_05086 I 0.817
ENSGMOG00000008342 Gadus morhua ENSGMOG00000008342 I 0.956
NR2E3 Gorilla gorilla ENSGGOG00000004383 I 0.963
NR2E3 Gallus gallus ENSGALG00000002093 I 0.980
NR2E3 Gasterosteus aculeatus ENSGACG00000017060 I 0.977
nr2e3 Gasterosteus aculeatus ENSGACG00000004739 I 0.959
NR2E3 Felis catus ENSFCAG00000031082 I 0.963
ENSFALG00000009699 Ficedula albicollis ENSFALG00000009699 I 0.980
NR2E3 Equus caballus ENSECAG00000015192 I 0.963
ENSGMOG00000019194 Gadus morhua ENSGMOG00000019194 I 0.977
ENSLACG00000022378 Latimeria chalumnae ENSLACG00000022378 I 0.977
ENSNLEG00000013807 Nomascus leucogenys ENSNLEG00000013807 I 0.963
ENSMPUG00000017103 Mustela putorius furo ENSMPUG00000017103 I 0.963
NR2E3 Monodelphis domestica ENSMODG00000001949 I 0.969
NR2E3 Macaca mulatta ENSMMUG00000019276 I 0.963
NR2E3 Myotis lucifugus ENSMLUG00000008408 I 0.963
NR2E3 Meleagris gallopavo ENSMGAG00000001449 I 0.786
ENSMEUG00000016597 Macropus eugenii ENSMEUG00000016597 I 0.969
ENSLOCG00000014973 Lepisosteus oculatus ENSLOCG00000014973 I 0.977
nr2e3 Danio rerio ENSDARG00000045904 I 0.976
ENSCSAG00000013721 Chlorocebus sabaeus ENSCSAG00000013721 I 0.963
CGI_10007932 Crassostrea gigas CGI_10007932 I 0.977
CBN22518 Caenorhabditis brenneri CBN22518 I 0.985
CBG14155 Caenorhabditis briggsae CBG14155 I 0.985
CapteG171557 Capitella teleta CapteG171557 I 0.978
Bm4485 Brugia malayi Bm4485 I 0.985
ADAC006988 Anopheles darlingi ADAC006988 I 0.977
ACYPI007601 Acyrthosiphon pisum ACYPI007601 I 0.977
AAEL007190 Aedes aegypti AAEL007190 I 0.977
CJA07370 Caenorhabditis japonica CJA07370 I 0.985
CRE00427 Caenorhabditis remanei CRE00427 I 0.985
NR2E3 Cavia porcellus ENSCPOG00000008974 I 0.963
NR2E3 Callithrix jacchus ENSCJAG00000018552 I 0.963
NR2E3 Bos taurus ENSBTAG00000014236 I 0.963
ENSAMXG00000017872 Astyanax mexicanus ENSAMXG00000017872 I 0.976
ENSAMEG00000008835 Ailuropoda melanoleuca ENSAMEG00000008835 I 0.917
NR2E3 Anolis carolinensis ENSACAG00000011910 I 0.977
EFV56045 Trichinella spiralis EFV56045 I 0.975
DAPPUDRAFT_106791 Daphnia pulex DAPPUDRAFT_106791 I 0.973
ENSOARG00000018808 Ovis aries ENSOARG00000018808 I 0.963
NR2E3 Otolemur garnettii ENSOGAG00000006128 I 0.963
ENSONIG00000007109 Oreochromis niloticus ENSONIG00000007109 I 0.977
GK20892 Drosophila willistoni FBgn0222886 I 0.977
GJ14974 Drosophila virilis FBgn0202177 I 0.977
GD11109 Drosophila simulans FBgn0182865 I 0.977
GL17752 Drosophila persimilis FBgn0155355 I 0.977
GI19610 Drosophila mojavensis FBgn0142347 I 0.977
GH20426 Drosophila grimshawi FBgn0127889 I 0.977
GF13031 Drosophila ananassae FBgn0090064 I 0.977
ENSXMAG00000015842 Xiphophorus maculatus ENSXMAG00000015842 I 0.971
GE13645 Drosophila yakuba FBgn0231304 I 0.977
GB49738 Apis mellifera GB49738 I 0.977
PHUM039420 Pediculus humanus PHUM039420 I 0.977
NV14480 Nasonia vitripennis NV14480 I 0.977
NEMVEDRAFT_v1g169225 Nematostella vectensis NEMVEDRAFT_v1g169225 I 0.798
LotgiG137595 Lottia gigantea LotgiG137595 I 0.977
LOAG_06205 Loa loa LOAG_06205 I 0.985
L798_02234 Zootermopsis nevadensis L798_02234 I 0.975
ISCW019467 Ixodes scapularis ISCW019467 I 0.780
HelroG139475 Helobdella robusta HelroG139475 I 0.976
ENSXMAG00000010311 Xiphophorus maculatus ENSXMAG00000010311 I 0.977
NR2E3 Tursiops truncatus ENSTTRG00000009410 I 0.963
ENSPFOG00000006516 Poecilia formosa ENSPFOG00000006516 I 0.971
ENSPFOG00000006106 Poecilia formosa ENSPFOG00000006106 I 0.977
NR2E3 Procavia capensis ENSPCAG00000014733 I 0.963
ENSPANG00000016257 Papio anubis ENSPANG00000016257 I 0.963
nr2e3 Oryzias latipes ENSORLG00000007175 I 0.971
NR2E3 Oryzias latipes ENSORLG00000000011 I 0.977
NR2E3 Ochotona princeps ENSOPRG00000006427 I 0.963
ENSONIG00000015396 Oreochromis niloticus ENSONIG00000015396 I 0.962
ENSPMAG00000009792 Petromyzon marinus ENSPMAG00000009792 I 0.985
NR2E3 Pan troglodytes ENSPTRG00000007242 I 0.963
NR2E3 Takifugu rubripes ENSTRUG00000015582 I 0.977
NR2E3 Tetraodon nigroviridis ENSTNIG00000005150 I 0.944
ENSTGUG00000004498 Taeniopygia guttata ENSTGUG00000004498 I 0.980
NR2E3 Tupaia belangeri ENSTBEG00000011672 I 0.960
ENSSTOG00000012080 Ictidomys tridecemlineatus ENSSTOG00000012080 I 0.963
NR2E3 Sus scrofa ENSSSCG00000004978 I 0.961
Nr2e3 Rattus norvegicus ENSRNOG00000050690 I 0.963
NR2E3 Pteropus vampyrus ENSPVAG00000009088 I 0.963
PHUM331460 Pediculus humanus PHUM331460 I 0.747