L596_g27130 (Steinernema carpocapsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L596_g27130 T309000_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-3
M00687_2.00
Caenorhabditis elegans
NNHGDHYANN

NNTRDHCDNN
PBM
Narasimhan et al.(2015)
pTH9163
0.788 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g27130.t1 Nuclear receptor 51 121
L596_g27130.t2 Nuclear receptor 51 121

Links

Other Nuclear receptor family TFs
Other Steinernema carpocapsae TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.788
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.808
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.808
L898_g14928 Steinernema monticolum L898_g14928 I 0.983
L893_g29555 Steinernema glaseri L893_g29555 I 0.781
L892_g650 Steinernema scapterisci L892_g650 I 0.788
L892_g19201 Steinernema scapterisci L892_g19201 I 0.991
L889_g29246 Steinernema feltiae L889_g29246 I 0.986
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.788
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.788
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.788
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.788
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.788
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.781
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.808
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.786
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.788
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.788
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.788
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.789
NECAME_04545 Necator americanus NECAME_04545 I 0.788
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.788
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.811
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.751
LOAG_18352 Loa loa LOAG_18352 I 0.788
CRE15289 Caenorhabditis remanei CRE15289 I 0.788
CRE06667 Caenorhabditis remanei CRE06667 I 0.751
CJA13646 Caenorhabditis japonica CJA13646 I 0.806
CBN20828 Caenorhabditis brenneri CBN20828 I 0.751
CBN19233 Caenorhabditis brenneri CBN19233 I 0.792
CBN07936 Caenorhabditis brenneri CBN07936 I 0.751
CBG07552 Caenorhabditis briggsae CBG07552 I 0.788
Bm14724 Brugia malayi Bm14724 I 0.788
PPA20304 Pristionchus pacificus PPA20304 I 0.828
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.751
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.779
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.766
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.788
ASU_10946 Ascaris suum ASU_10946 I 0.788
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.772
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.788
Minc13525 Meloidogyne incognita Minc13525 I 0.808
Minc01725 Meloidogyne incognita Minc01725 I 0.808
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.788
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.788