L898_g18539 (Steinernema monticolum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L898_g18539 T309443_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-86
M02415_2.00
Caenorhabditis elegans
KTGTAGTC

GACTACAM
PBM
Weirauch et al.(2014)
pTH8598
0.759 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g18539.t1 Nuclear receptor 10 80

Links

Other Nuclear receptor family TFs
Other Steinernema monticolum TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30147.m014313 Ricinus communis 30147.m014313 I 0.000
30190.m011120 Ricinus communis 30190.m011120 I 0.000
AMTR_s00069p00141520 Amborella trichopoda AMTR_s00069p00141520 I 0.000
Bo9g104770 Brassica oleracea Bo9g104770 I 0.000
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.000
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.000
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.000
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.000
Bra028290 Brassica rapa Bra028290 I 0.000
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.000
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.000
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.000
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.000
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.000
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.000
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.000
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.000
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.000
Ca_04504 Cicer arietinum Ca_04504 I 0.000
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.000
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.000
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.000
Cla002362 Citrullus lanatus Cla002362 I 0.000
Cla006315 Citrullus lanatus Cla006315 I 0.000
Cla011674 Citrullus lanatus Cla011674 I 0.000
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.000
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.000
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.000
DREB1A Arabidopsis thaliana AT4G25480 D 0.000
DREB1C Arabidopsis thaliana AT4G25470 D 0.000
DREB1D Arabidopsis thaliana AT5G51990 D 0.000
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.000
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.000
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.000
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.000
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.000
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.000
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.000
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.000
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.000
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.000
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.000
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.000
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.000
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.000
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.000
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.000
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.000
GLYMA12G30710 Glycine max GLYMA12G30710 I 0.000
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.000
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.000
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.000
Gorai.003G162700 Gossypium raimondii Gorai.003G162700 I 0.000
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.000
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.000
GSMUA_Achr4G19660_001 Musa acuminata GSMUA_Achr4G19660_001 I 0.000
Lus10019455.g Linum usitatissimum Lus10019455.g I 0.000
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.000
MDP0000154764 Malus domestica MDP0000154764 I 0.000
MDP0000198054 Malus domestica MDP0000198054 I 0.000
mgf016974m Mimulus guttatus mgf016974m I 0.000
mgf017136m Mimulus guttatus mgf017136m I 0.000
mgf018631m Mimulus guttatus mgf018631m I 0.000
mgf018934m Mimulus guttatus mgf018934m I 0.000
mgf022408m Mimulus guttatus mgf022408m I 0.000
mgf026339m Mimulus guttatus mgf026339m I 0.000
mgf026642m Mimulus guttatus mgf026642m I 0.000
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.000
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.000
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.000
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.000
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.000
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.000
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.000
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.000
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.000
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.000
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.000
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.000
PK23332.1 Cannabis sativa PK23332.1 I 0.000
Pm023775 Prunus mume Pm023775 I 0.000
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.000
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.000
POPTR_0014s05500 Populus trichocarpa POPTR_0014s05500 I 0.000
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.000
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.000
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.000
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.000
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.000
SapurV1A.0490s0260 Salix purpurea SapurV1A.0490s0260 I 0.000
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.000
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.000
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.000
TCM_016175 Theobroma cacao TCM_016175 I 0.000
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.000
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.000
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.000