CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf06872-augustus-gene-0.3
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
maker-nMf.1.1.scaf06872-augustus-gene-0.3
T309577_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf06872-augustus-gene-0.3-mRNA-1
Nuclear receptor
46
119
KECKELCRKNPHARQYIFKGVTSCDGCRGFFKRSIRRNLNYKCKESNACPVDIARRNQCQACRFRRCLAVQMNR
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_000097300
Globodera pallida
GPLIN_000097300
I
0.914
e_gw.333.48.1
Branchiostoma floridae
e_gw.333.48.1
I
0.896
MhA1_Contig1097.frz3.gene5
Meloidogyne hapla
MhA1_Contig1097.frz3.gene5
N
0.887
CGI_10027671
Crassostrea gigas
CGI_10027671
I
0.870
Ocbimv22038770m.g
Octopus bimaculoides
Ocbimv22038770m.g
I
0.870
SMU15038277
Schmidtea mediterranea
SMU15038277
I
0.868
LotgiG120392
Lottia gigantea
LotgiG120392
I
0.867
NEMVEDRAFT_v1g132075
Nematostella vectensis
NEMVEDRAFT_v1g132075
I
0.862
DAPPUDRAFT_116667
Daphnia pulex
DAPPUDRAFT_116667
I
0.851
DME_0000705401
Dracunculus medinensis
DME_0000705401
I
0.849
Sakowv30030751m.g
Saccoglossus kowalevskii
Sakowv30030751m.g
I
0.847
CapteG53417
Capitella teleta
CapteG53417
I
0.846
ALUE_0000688601
Ascaris lumbricoides
ALUE_0000688601
I
0.845
ASU_00538
Ascaris suum
ASU_00538
I
0.845
TCNE_0001744001
Toxocara canis
TCNE_0001744001
I
0.845
WUBG_07942
Wuchereria bancrofti
WUBG_07942
N
0.842
augustus_masked-nMf.1.1.scaf00796-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00796-processed-gene-0.1
N
0.836
CBN10913
Caenorhabditis brenneri
CBN10913
I
0.828
BGLB009763
Biomphalaria glabrata
BGLB009763
I
0.828
nAv.1.0.1.g01655
Acanthocheilonema viteae
nAv.1.0.1.g01655
I
0.827
NV17364
Nasonia vitripennis
NV17364
I
0.827
Minc02801
Meloidogyne incognita
Minc02801
N
0.821
PHUM494010
Pediculus humanus
PHUM494010
I
0.812
NEMVEDRAFT_v1g99425
Nematostella vectensis
NEMVEDRAFT_v1g99425
I
0.812
nDi.2.2.2.g01137
Dirofilaria immitis
nDi.2.2.2.g01137
I
0.811
nhr-236
Caenorhabditis elegans
WBGene00021417
I
0.807
YQE_08225
Dendroctonus ponderosae
YQE_08225
I
0.803
TC030676
Tribolium castaneum
TC030676
I
0.803
LDEC002297
Leptinotarsa decemlineata
LDEC002297
I
0.802
EFV59394
Trichinella spiralis
EFV59394
I
0.797
D917_07429
Trichinella nativa
D917_07429
I
0.797
CBG16821
Caenorhabditis briggsae
CBG16821
I
0.792
Cflo_11610--XP_624042.1_APIME
Camponotus floridanus
Cflo_11610--XP_624042.1_APIME
I
0.792
Hsal_03554--XP_624042.1_APIME
Harpegnathos saltator
Hsal_03554--XP_624042.1_APIME
I
0.792
AMIN000538
Anopheles minimus
AMIN000538
I
0.789
AMEC010971
Anopheles melas
AMEC010971
I
0.789
AMAM020935
Anopheles maculatus
AMAM020935
I
0.789
AQUA006534
Anopheles quadriannulatus
AQUA006534
I
0.789
ASTEI07503
Anopheles stephensi
ASTEI07503
I
0.789
AGAP001348
Anopheles gambiae
AGAP001348
I
0.789
CPIJ017884
Culex quinquefasciatus
CPIJ017884
I
0.789
AFUN001116
Anopheles funestus
AFUN001116
I
0.789
PNRLIKE
Aedes aegypti
AAEL008043
I
0.789
ASIS017452
Anopheles sinensis
ASIS017452
I
0.789
AMEM007574
Anopheles merus
AMEM007574
I
0.789
AARA001809
Anopheles arabiensis
AARA001809
I
0.789
CpipJ_CPIJ017884
Culex pipiens
CpipJ_CPIJ017884
I
0.789
AFAF018414
Anopheles farauti
AFAF018414
I
0.789
AATE006105
Anopheles atroparvus
AATE006105
I
0.789
AALB002684
Anopheles albimanus
AALB002684
I
0.789
AEPI001141
Anopheles epiroticus
AEPI001141
I
0.789
ADIR010552
Anopheles dirus
ADIR010552
I
0.789
ACUA020513
Anopheles culicifacies
ACUA020513
I
0.789
ACOM033973
Anopheles coluzzii
ACOM033973
I
0.789
L798_02901
Zootermopsis nevadensis
L798_02901
I
0.788
KGM_02557
Danaus plexippus
KGM_02557
I
0.787
Hba_13386
Heterorhabditis bacteriophora
Hba_13386
I
0.784
SPU_017375
Strongylocentrotus purpuratus
SPU_017375
I
0.783
BGIBMGA000670
Bombyx mori
BGIBMGA000670
I
0.782
CLEC008419
Cimex lectularius
CLEC008419
I
0.782
RPRC009755
Rhodnius prolixus
RPRC009755
I
0.780
TTRE_0000264801
Trichuris trichiura
TTRE_0000264801
I
0.774
D918_08129
Trichuris suis
D918_08129
I
0.774
TMUE_s0002021300
Trichuris muris
TMUE_s0002021300
I
0.765
SMAR005242
Strigamia maritima
SMAR005242
I
0.763
BXY_0757200
Bursaphelenchus xylophilus
BXY_0757200
I
0.755
GB52015
Apis mellifera
GB52015
I
0.753
HMEL013397
Heliconius melpomene
HMEL013397
I
0.753
SINV14755
Solenopsis invicta
SINV14755
I
0.753