SMUV_0000241401 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0000241401 T310405_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN

NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.759 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000241401-mRNA-1 Nuclear receptor 9 78

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ALUE_0000922801 Ascaris lumbricoides ALUE_0000922801 N 0.845
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.787
ASU_02073 Ascaris suum ASU_02073 N 0.845
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.824
CBG09567 Caenorhabditis briggsae CBG09567 I 0.775
CBG14515 Caenorhabditis briggsae CBG14515 I 0.805
CBN12210 Caenorhabditis brenneri CBN12210 I 0.805
CJA02156 Caenorhabditis japonica CJA02156 I 0.805
CRE00301 Caenorhabditis remanei CRE00301 I 0.805
CRE08691 Caenorhabditis remanei CRE08691 I 0.799
CRE30948 Caenorhabditis remanei CRE30948 I 0.750
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.981
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.844
GPLIN_001629700 Globodera pallida GPLIN_001629700 N 0.850
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.787
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.787
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.749
L596_g27594 Steinernema carpocapsae L596_g27594 N 0.817
L889_g21170 Steinernema feltiae L889_g21170 N 0.817
L889_g6696 Steinernema feltiae L889_g6696 I 0.759
L889_g9698 Steinernema feltiae L889_g9698 I 0.762
L889_g987 Steinernema feltiae L889_g987 I 0.762
L892_g15823 Steinernema scapterisci L892_g15823 N 0.817
L892_g8145 Steinernema scapterisci L892_g8145 I 0.750
L893_g4569 Steinernema glaseri L893_g4569 I 0.753
L898_g30838 Steinernema monticolum L898_g30838 N 0.817
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.773
Minc14668 Meloidogyne incognita Minc14668 I 0.824
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.792
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.762
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.781
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.749
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.783
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.759
nhr-45 Caenorhabditis elegans WBGene00003635 I 0.805
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.792
SMUV_0000241501 Syphacia muris SMUV_0000241501 N 0.984
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.786
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.790
TCNE_0000667201 Toxocara canis TCNE_0000667201 N 0.909