CJA06788 (Caenorhabditis japonica)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 CJA06788 T311488_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Poxm
M03944_2.00 		Drosophila melanogaster
CAVTCAWGCGTGACR
YGTCACGCWTGABTG		 SELEX
Nitta et al.(2015)
Poxm_1 		0.744 0.744
Poxm
M03945_2.00 		Drosophila melanogaster
NYSAWGCRTRACS
SGTYAYGCWTSRN		 SELEX
Nitta et al.(2015)
Poxm_2 		0.744 0.744
Poxm
M06436_2.00 		Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA
TCAYGSNYNDNBKNNNNNN		 B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129 		0.744 0.744
pax9
M11204_2.00 		Danio rerio Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX9_B 		0.712 0.712
PAX1
M03442_2.00 		Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH		 SELEX
Jolma et al.(2013)
PAX1_1 		0.704 0.704
PAX9
M03444_2.00 		Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN		 SELEX
Jolma et al.(2013)
PAX9_1 		0.704 0.704
PAX1
M05687_2.00 		Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX 		0.704 0.704
PAX9
M05689_2.00 		Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV		 SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX 		0.704 0.704
PAX1
M11207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX1_B 		0.704 0.704
PAX1
M05688_2.00 		Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX 		0.704 0.704
PAX9
M05690_2.00 		Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV		 SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX 		0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA06788 Paired box 59 183

Links

Other Paired box family TFs
Other Caenorhabditis japonica TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN25998 Caenorhabditis brenneri CBN25998 I 0.904
CBN07010 Caenorhabditis brenneri CBN07010 I 0.904
pax-1 Caenorhabditis elegans WBGene00003937 I 0.896
CRE05503 Caenorhabditis remanei CRE05503 I 0.896
CBG24786 Caenorhabditis briggsae CBG24786 I 0.843
SMUV_0000337801 Syphacia muris SMUV_0000337801 I 0.776
EVEC_0000163101 Enterobius vermicularis EVEC_0000163101 I 0.776
ANCCEY_02265 Ancylostoma ceylanicum ANCCEY_02265 I 0.760
PEQ_0000430901 Parascaris equorum PEQ_0000430901 I 0.755
ANCCAN_01783 Ancylostoma caninum ANCCAN_01783 I 0.755
DICVIV_10778 Dictyocaulus viviparus DICVIV_10778 I 0.752
ACOC_0000962101 Angiostrongylus costaricensis ACOC_0000962101 I 0.752
ASU_08322 Ascaris suum ASU_08322 I 0.752
ALUE_0000964501 Ascaris lumbricoides ALUE_0000964501 I 0.752
GA21910 Drosophila pseudoobscura FBgn0081895 I 0.744
GE24855 Drosophila yakuba FBgn0241954 I 0.744
GK14101 Drosophila willistoni FBgn0216107 I 0.744
GG17455 Drosophila erecta FBgn0109681 I 0.744
GF16668 Drosophila ananassae FBgn0093689 I 0.744
GJ22751 Drosophila virilis FBgn0209855 I 0.744
LCUP007799 Lucilia cuprina LCUP007799 I 0.744
GM26349 Drosophila sechellia FBgn0181202 I 0.744
GL24118 Drosophila persimilis FBgn0161708 I 0.744
GI22750 Drosophila mojavensis FBgn0145477 I 0.744
Poxm Drosophila melanogaster FBgn0003129 D 0.744
GH17421 Drosophila grimshawi FBgn0124891 I 0.744
TCNE_0001785701 Toxocara canis TCNE_0001785701 I 0.744
HPLM_0000508801 Haemonchus placei HPLM_0000508801 I 0.744
L893_g11572 Steinernema glaseri L893_g11572 I 0.736
ISCW011634 Ixodes scapularis ISCW011634 I 0.736
MDOA001030 Musca domestica MDOA001030 I 0.736
PPAI009002 Phlebotomus papatasi PPAI009002 I 0.736
LLOJ004808 Lutzomyia longipalpis LLOJ004808 I 0.736
AMAM000649 Anopheles maculatus AMAM000649 I 0.728
AFAF006072 Anopheles farauti AFAF006072 I 0.728
AMEM000130 Anopheles merus AMEM000130 I 0.728
AMEC017516 Anopheles melas AMEC017516 I 0.728
AMIN005066 Anopheles minimus AMIN005066 I 0.728
AATE019429 Anopheles atroparvus AATE019429 I 0.728
CLEC012019 Cimex lectularius CLEC012019 I 0.728
PHUM515110 Pediculus humanus PHUM515110 I 0.728
YQE_12494 Dendroctonus ponderosae YQE_12494 I 0.728
AALB006349 Anopheles albimanus AALB006349 I 0.728
AARA001070 Anopheles arabiensis AARA001070 I 0.728
ADIR000995 Anopheles dirus ADIR000995 I 0.728
ACUA000500 Anopheles culicifacies ACUA000500 I 0.728
AQUA002471 Anopheles quadriannulatus AQUA002471 I 0.728
AEPI005638 Anopheles epiroticus AEPI005638 I 0.728
ASTEI07741 Anopheles stephensi ASTEI07741 I 0.728
CapteG64892 Capitella teleta CapteG64892 I 0.728
TELCIR_14257 Teladorsagia circumcincta TELCIR_14257 I 0.728
OFLC_0000054701 Onchocerca flexuosa OFLC_0000054701 N 0.728
DAPPUDRAFT_307722 Daphnia pulex DAPPUDRAFT_307722 I 0.728
L898_g3148 Steinernema monticolum L898_g3148 I 0.728
HPBE_0001739601 Heligmosomoides bakeri HPBE_0001739601 I 0.728
ASIM_0001701001 Anisakis simplex ASIM_0001701001 I 0.728
AGAP001493 Anopheles gambiae AGAP001493 I 0.728
ACAC_0001249001 Angiostrongylus cantonensis ACAC_0001249001 I 0.728
ADAC006866 Anopheles darlingi ADAC006866 I 0.728
KGM_09724 Danaus plexippus KGM_09724 I 0.720
HMEL004481 Heliconius melpomene HMEL004481 I 0.720
L892_g31296 Steinernema scapterisci L892_g31296 I 0.720
SPAL_0000396700 Strongyloides papillosus SPAL_0000396700 I 0.720
L596_g23601 Steinernema carpocapsae L596_g23601 I 0.720
BGIBMGA000787 Bombyx mori BGIBMGA000787 I 0.720
ACEP27324 Atta cephalotes ACEP27324 I 0.720
WBGene00242657 Onchocerca volvulus WBGene00242657 N 0.720
L889_g19368 Steinernema feltiae L889_g19368 I 0.720
EEL_0000498601 Elaeophora elaphi EEL_0000498601 N 0.720
SVUK_0000340101 Strongylus vulgaris SVUK_0000340101 I 0.716
pax9 Tetraodon nigroviridis ENSTNIG00000019284 I 0.712
SINV15629 Solenopsis invicta SINV15629 I 0.712
pax9 Takifugu rubripes ENSTRUG00000011965 I 0.712
SMAR007866 Strigamia maritima SMAR007866 I 0.712
ENSPFOG00000017550 Poecilia formosa ENSPFOG00000017550 I 0.712
TC008838 Tribolium castaneum TC008838 I 0.712
ENSTNIG00000002104 Tetraodon nigroviridis ENSTNIG00000002104 I 0.712
WUBG_12339 Wuchereria bancrofti WUBG_12339 N 0.712
ENSXMAG00000015762 Xiphophorus maculatus ENSXMAG00000015762 I 0.712
ENSONIG00000000990 Oreochromis niloticus ENSONIG00000000990 I 0.712
PAX1 Pteropus vampyrus ENSPVAG00000002604 I 0.712
LOAG_17445 Loa loa LOAG_17445 N 0.712
GB52620 Apis mellifera GB52620 I 0.712
NV11293 Nasonia vitripennis NV11293 I 0.712
ENSLOCG00000013992 Lepisosteus oculatus ENSLOCG00000013992 I 0.712
HHAL005838-PA Halyomorpha halys HHAL005838-PA I 0.712
Sakowv30044183m.g Saccoglossus kowalevskii Sakowv30044183m.g I 0.712
ENSCSAVG00000007806 Ciona savignyi ENSCSAVG00000007806 I 0.712
pax9 Danio rerio ENSDARG00000053829 D 0.712
BTMF_0001588101 Brugia timori BTMF_0001588101 N 0.712
ENSGMOG00000009128 Gadus morhua ENSGMOG00000009128 I 0.712
pax9 Gasterosteus aculeatus ENSGACG00000011298 I 0.712
ENSLACG00000009610 Latimeria chalumnae ENSLACG00000009610 I 0.712
nAv.1.0.1.g02318 Acanthocheilonema viteae nAv.1.0.1.g02318 N 0.712
SVE_0281100 Strongyloides venezuelensis SVE_0281100 I 0.712
ACYPI005583 Acyrthosiphon pisum ACYPI005583 I 0.712
Cflo_08772--XP_001121954.1_APIME Camponotus floridanus Cflo_08772--XP_001121954.1_APIME I 0.712
nDi.2.2.2.g06454 Dirofilaria immitis nDi.2.2.2.g06454 N 0.712
SSTP_0000083300 Strongyloides stercoralis SSTP_0000083300 I 0.712
ENSAMXG00000002161 Astyanax mexicanus ENSAMXG00000002161 I 0.712
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.709
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.709
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.709
ENSXMAG00000019114 Xiphophorus maculatus ENSXMAG00000019114 I 0.704
pax9.L Xenopus laevis XB-GENE-864845 I 0.704
ENSP00000355245 Macaca fascicularis ENSP00000355245 I 0.704
ENSP00000381499 Macaca fascicularis ENSP00000381499 I 0.704
ENSBTAP00000008861-D1 Bos grunniens ENSBTAP00000008861-D1 I 0.704
SPU_006683 Strongylocentrotus purpuratus SPU_006683 I 0.704
Afo_R004464 Aptenodytes forsteri Afo_R004464 I 0.704
Alligator_sinensis_CCG004503.1 Alligator sinensis Alligator_sinensis_CCG004503.1 I 0.704
ENSP00000384817-D1 Bos grunniens ENSP00000384817-D1 I 0.704
Ogr19508 Ophisaurus gracilis Ogr19508 I 0.704
pax1 Xenopus tropicalis XB-GENE-487951 I 0.704
Aan_R005718 Calypte anna Aan_R005718 I 0.704
pax9 Xenopus tropicalis XB-GENE-482238 I 0.704
estExt_fgenesh2_pg.C_420056 Branchiostoma floridae estExt_fgenesh2_pg.C_420056 I 0.704
Pvit_17942 Pogona vitticeps Pvit_17942 I 0.704
pax1.S Xenopus laevis XB-GENE-865751 I 0.704
PAX1 Sus scrofa ENSSSCG00000007112 I 0.704
PAX1 Homo sapiens ENSG00000125813 D 0.704
PAX9 Homo sapiens ENSG00000198807 D 0.704
pax1a Gasterosteus aculeatus ENSGACG00000006987 I 0.704
PAX9 Gallus gallus ENSGALG00000010114 I 0.704
PAX1 Felis catus ENSFCAG00000004293 I 0.704
PAX9 Felis catus ENSFCAG00000001024 I 0.704
PAX9 Equus caballus ENSECAG00000023712 I 0.704
PAX1 Erinaceus europaeus ENSEEUG00000007846 I 0.704
PAX9 Echinops telfairi ENSETEG00000002086 I 0.704
ENSFALG00000006155 Ficedula albicollis ENSFALG00000006155 I 0.704
ENSGALG00000028576 Gallus gallus ENSGALG00000028576 I 0.704
PAX9 Gorilla gorilla ENSGGOG00000001528 I 0.704
ENSLOCG00000016871 Lepisosteus oculatus ENSLOCG00000016871 I 0.704
ENSMEUG00000002095 Macropus eugenii ENSMEUG00000002095 I 0.704
ENSMEUG00000010140 Macropus eugenii ENSMEUG00000010140 I 0.704
PAX9 Meleagris gallopavo ENSMGAG00000012530 I 0.704
PAX9 Loxodonta africana ENSLAFG00000017541 I 0.704
ENSLACG00000015921 Latimeria chalumnae ENSLACG00000015921 I 0.704
PAX1 Gorilla gorilla ENSGGOG00000016075 I 0.704
ENSGMOG00000017053 Gadus morhua ENSGMOG00000017053 I 0.704
ENSGMOG00000018913 Gadus morhua ENSGMOG00000018913 I 0.704
Pax1 Dipodomys ordii ENSDORG00000016051 I 0.704
PAX1 Dasypus novemcinctus ENSDNOG00000033546 I 0.704
ENSAPLG00000012856 Anas platyrhynchos ENSAPLG00000012856 I 0.704
PAX1 Bos taurus ENSBTAG00000006742 I 0.704
PAX9 Bos taurus ENSBTAG00000009186 I 0.704
PAX1 Canis familiaris ENSCAFG00000005170 I 0.704
ENSAMXG00000018287 Astyanax mexicanus ENSAMXG00000018287 I 0.704
ENSAMXG00000008583 Astyanax mexicanus ENSAMXG00000008583 I 0.704
ENSACAG00000001481 Anolis carolinensis ENSACAG00000001481 I 0.704
ENSACAG00000010563 Anolis carolinensis ENSACAG00000010563 I 0.704
ENSAMEG00000002906 Ailuropoda melanoleuca ENSAMEG00000002906 I 0.704
ENSAMEG00000012642 Ailuropoda melanoleuca ENSAMEG00000012642 I 0.704
PAX9 Canis familiaris ENSCAFG00000013690 I 0.704
ENSCING00000024971 Ciona intestinalis ENSCING00000024971 I 0.704
ENSCSAG00000015463 Chlorocebus sabaeus ENSCSAG00000015463 I 0.704
pax1a Danio rerio ENSDARG00000008203 I 0.704
pax1b Danio rerio ENSDARG00000073814 I 0.704
PAX9 Dasypus novemcinctus ENSDNOG00000000352 I 0.704
ENSCSAG00000011068 Chlorocebus sabaeus ENSCSAG00000011068 I 0.704
PAX9 Cavia porcellus ENSCPOG00000010951 I 0.704
PAX1 Callithrix jacchus ENSCJAG00000005773 I 0.704
PAX9 Callithrix jacchus ENSCJAG00000016460 I 0.704
PAX1 Cavia porcellus ENSCPOG00000002886 I 0.704
PAX1 Tursiops truncatus ENSTTRG00000002444 I 0.704
PAX9 Microcebus murinus ENSMICG00000010808 I 0.704
ENSPSIG00000010961 Pelodiscus sinensis ENSPSIG00000010961 I 0.704
PAX9 Pan troglodytes ENSPTRG00000006281 I 0.704
PAX1 Pan troglodytes ENSPTRG00000013311 I 0.704
Pax9 Rattus norvegicus ENSRNOG00000008826 I 0.704
ENSPPYG00000010758 Pongo abelii ENSPPYG00000010758 I 0.704
ENSPPYG00000005755 Pongo abelii ENSPPYG00000005755 I 0.704
ENSPANG00000008282 Papio anubis ENSPANG00000008282 I 0.704
PAX1 Procavia capensis ENSPCAG00000003556 I 0.704
ENSPFOG00000003208 Poecilia formosa ENSPFOG00000003208 I 0.704
ENSPMAG00000010308 Petromyzon marinus ENSPMAG00000010308 I 0.704
PAX9 Sorex araneus ENSSARG00000000337 I 0.704
ENSSHAG00000005531 Sarcophilus harrisii ENSSHAG00000005531 I 0.704
ENSTGUG00000007526 Taeniopygia guttata ENSTGUG00000007526 I 0.704
PAX9 Taeniopygia guttata ENSTGUG00000012015 I 0.704
pax1a Tetraodon nigroviridis ENSTNIG00000016891 I 0.704
pax1a Takifugu rubripes ENSTRUG00000008079 I 0.704
PAX9 Tupaia belangeri ENSTBEG00000002460 I 0.704
ENSSTOG00000015730 Ictidomys tridecemlineatus ENSSTOG00000015730 I 0.704
ENSSHAG00000017556 Sarcophilus harrisii ENSSHAG00000017556 I 0.704
ENSSSCG00000001943 Sus scrofa ENSSSCG00000001943 I 0.704
ENSSTOG00000003000 Ictidomys tridecemlineatus ENSSTOG00000003000 I 0.704
ENSPANG00000000932 Papio anubis ENSPANG00000000932 I 0.704
pax1 Oryzias latipes ENSORLG00000017412 I 0.704
ENSMPUG00000001187 Mustela putorius furo ENSMPUG00000001187 I 0.704
ENSMPUG00000016259 Mustela putorius furo ENSMPUG00000016259 I 0.704
Pax9 Mus musculus ENSMUSG00000001497 I 0.704
Pax1 Mus musculus ENSMUSG00000037034 I 0.704
PAX9 Monodelphis domestica ENSMODG00000012681 I 0.704
PAX1 Monodelphis domestica ENSMODG00000006198 I 0.704
PAX1 Myotis lucifugus ENSMLUG00000014710 I 0.704
PAX9 Macaca mulatta ENSMMUG00000009648 I 0.704
PAX1 Macaca mulatta ENSMMUG00000019409 I 0.704
ENSNLEG00000003346 Nomascus leucogenys ENSNLEG00000003346 I 0.704
ENSNLEG00000010049 Nomascus leucogenys ENSNLEG00000010049 I 0.704
ENSOGAG00000013131 Otolemur garnettii ENSOGAG00000013131 I 0.704
PAX1 Otolemur garnettii ENSOGAG00000033162 I 0.704
ENSONIG00000008137 Oreochromis niloticus ENSONIG00000008137 I 0.704
PAX1 Ochotona princeps ENSOPRG00000017249 I 0.704
PAX9 Myotis lucifugus ENSMLUG00000011407 I 0.704
PAX1 Oryctolagus cuniculus ENSOCUG00000003276 I 0.704
PAX1 Ornithorhynchus anatinus ENSOANG00000002008 I 0.704
PAX9 Ornithorhynchus anatinus ENSOANG00000014065 I 0.704
ENSOARG00000004951 Ovis aries ENSOARG00000004951 I 0.704
ENSOARG00000008050 Ovis aries ENSOARG00000008050 I 0.704
PAX1 Loxodonta africana ENSLAFG00000008908 I 0.702