tetur04g02670 (Tetranychus urticae)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 tetur04g02670 T312097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Poxn
M03946_2.00
Drosophila melanogaster
DGCGTGACSGTCACGSY

RSCGTGACSGTCACGCH
SELEX
Nitta et al.(2015)
Poxn_1
0.760 0.760
Poxn
M03947_2.00
Drosophila melanogaster
RSCGKGACSGTTMCGSW

WSCGKAACSGTCMCGSY
SELEX
Nitta et al.(2015)
Poxn_2
0.760 0.760
Poxn
M03948_2.00
Drosophila melanogaster
NCGTTCCGGAACGD

HCGTTCCGGAACGN
SELEX
Nitta et al.(2015)
Poxn_3
0.760 0.760
Poxn
M06437_2.00
Drosophila melanogaster
RSCGTGACG

CGTCACGSY
B1H
Zhu et al.(2011)
Poxn_SOLEXA_5_FBgn0003130
0.760 0.760
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.712 0.712
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN

NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.712 0.712
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM

KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.712 0.712
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.712 0.712
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN

NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.712 0.712
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS

SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.712 0.712
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN

NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.712 0.712
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN

NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.712 0.712
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC

GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.712 0.712
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC

GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.712 0.712
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN

NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.712 0.712
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC

GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.712 0.712
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM

KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.712 0.712
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG

CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.712 0.712
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC

GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.712 0.712
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM

KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.712 0.712
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN

NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.712 0.712
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC

GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.712 0.712
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB

VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.712 0.712
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH

DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.712 0.712
PAX5
M11210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.712 0.712
PAX5
M11211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.712 0.712
PAX5
M11212_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
tetur04g02670.1 Paired box 5 143

Links

Other Paired box family TFs
Other Tetranychus urticae TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000010127 Ailuropoda melanoleuca ENSAMEG00000010127 I 0.712
Alligator_sinensis_CCG012866.1 Alligator sinensis Alligator_sinensis_CCG012866.1 I 0.704
PAX5 Anolis carolinensis ENSACAG00000011646 I 0.704
AATE014886 Anopheles atroparvus AATE014886 I 0.768
ACOM039288 Anopheles coluzzii ACOM039288 I 0.768
AFAF002012 Anopheles farauti AFAF002012 I 0.768
AFUN008226 Anopheles funestus AFUN008226 I 0.773
AGAP008818 Anopheles gambiae AGAP008818 I 0.768
AMEC005358 Anopheles melas AMEC005358 I 0.768
AMEM011238 Anopheles merus AMEM011238 I 0.768
ASIS007673 Anopheles sinensis ASIS007673 I 0.760
GB53602 Apis mellifera GB53602 I 0.752
Afo_R005136 Aptenodytes forsteri Afo_R005136 I 0.712
ENSAMXG00000012274 Astyanax mexicanus ENSAMXG00000012274 I 0.704
BGIBMGA013358 Bombyx mori BGIBMGA013358 I 0.702
ENSP00000350844-D1 Bos grunniens ENSP00000350844-D1 I 0.712
PAX5 Bos taurus ENSBTAG00000012498 I 0.712
Brh_R001926 Buceros rhinoceros Brh_R001926 I 0.712
PAX5 Callithrix jacchus ENSCJAG00000010379 I 0.712
Aan_R002178 Calypte anna Aan_R002178 I 0.712
Cflo_00736--XP_001122746.1_APIME Camponotus floridanus Cflo_00736--XP_001122746.1_APIME I 0.720
PAX5 Canis familiaris ENSCAFG00000002357 I 0.712
CapteG119889 Capitella teleta CapteG119889 I 0.704
CapteG166874 Capitella teleta CapteG166874 I 0.752
PAX5 Cavia porcellus ENSCPOG00000009987 I 0.712
ENSCSAG00000010751 Chlorocebus sabaeus ENSCSAG00000010751 I 0.712
PAX5 Choloepus hoffmanni ENSCHOG00000003521 I 0.712
CGI_10012686 Crassostrea gigas CGI_10012686 I 0.752
CGI_10024166 Crassostrea gigas CGI_10024166 I 0.720
CpipJ_CPIJ009206 Culex pipiens CpipJ_CPIJ009206 I 0.829
CPIJ009206 Culex quinquefasciatus CPIJ009206 I 0.829
KGM_01567 Danaus plexippus KGM_01567 I 0.752
pax2a Danio rerio ENSDARG00000028148 I 0.712
pax5 Danio rerio ENSDARG00000037383 I 0.704
pax2b Danio rerio ENSDARG00000032578 D 0.712
DAPPUDRAFT_311028 Daphnia pulex DAPPUDRAFT_311028 I 0.704
PAX5 Dasypus novemcinctus ENSDNOG00000035956 I 0.704
GF13369 Drosophila ananassae FBgn0090401 I 0.752
GF20618 Drosophila ananassae FBgn0097624 I 0.704
GG16406 Drosophila erecta FBgn0108638 I 0.712
GG22332 Drosophila erecta FBgn0114504 I 0.760
GH23966 Drosophila grimshawi FBgn0131423 I 0.712
GH20564 Drosophila grimshawi FBgn0128027 I 0.752
sv Drosophila melanogaster FBgn0005561 D 0.712
Poxn Drosophila melanogaster FBgn0003130 D 0.760
GI14046 Drosophila mojavensis FBgn0136800 I 0.712
GI19757 Drosophila mojavensis FBgn0142494 I 0.760
GL18401 Drosophila persimilis FBgn0156002 I 0.712
GL11851 Drosophila persimilis FBgn0149459 I 0.760
GA20926 Drosophila pseudoobscura FBgn0080915 I 0.760
spa-sv Drosophila pseudoobscura FBgn0249275 I 0.712
GM20119 Drosophila sechellia FBgn0175002 I 0.760
GD25595 Drosophila simulans FBgn0196881 I 0.760
GD24421 Drosophila simulans FBgn0195757 I 0.712
GJ18164 Drosophila virilis FBgn0205329 I 0.760
GJ13730 Drosophila virilis FBgn0200951 I 0.712
GK19611 Drosophila willistoni FBgn0221609 I 0.760
GK13586 Drosophila willistoni FBgn0215594 I 0.712
GE14129 Drosophila yakuba FBgn0231752 I 0.760
GE14566 Drosophila yakuba FBgn0232164 I 0.712
PAX5 Echinops telfairi ENSETEG00000002360 I 0.712
PAX5 Equus caballus ENSECAG00000000551 I 0.712
PAX5 Erinaceus europaeus ENSEEUG00000012531 I 0.712
PAX5 Felis catus ENSFCAG00000001628 I 0.712
ENSFALG00000012983 Ficedula albicollis ENSFALG00000012983 I 0.712
ENSGMOG00000012561 Gadus morhua ENSGMOG00000012561 I 0.712
ENSGMOG00000000463 Gadus morhua ENSGMOG00000000463 I 0.704
Pax-2 Gallus gallus ENSGALG00000005689 I 0.712
Pax5B Gallus gallus ENSGALG00000016431 D 0.712
pax2b Gasterosteus aculeatus ENSGACG00000002432 I 0.704
pax2a Gasterosteus aculeatus ENSGACG00000008391 I 0.712
Gfo_R013093 Geospiza fortis Gfo_R013093 I 0.712
PAX5 Gorilla gorilla ENSGGOG00000003633 I 0.712
Hsal_04457--XP_001122746.1_APIME Harpegnathos saltator Hsal_04457--XP_001122746.1_APIME I 0.752
HMEL002901 Heliconius melpomene HMEL002901 I 0.752
PAX2 Homo sapiens ENSG00000075891 D 0.712
PAX5 Homo sapiens ENSG00000196092 D 0.712
ENSSTOG00000024354 Ictidomys tridecemlineatus ENSSTOG00000024354 I 0.712
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.712
ENSLOCG00000005490 Lepisosteus oculatus ENSLOCG00000005490 I 0.704
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.704
LotgiG99097 Lottia gigantea LotgiG99097 I 0.768
PAX5 Loxodonta africana ENSLAFG00000028851 I 0.712
PAX2 Loxodonta africana ENSLAFG00000002388 I 0.702
LCUP005878 Lucilia cuprina LCUP005878 I 0.776
LCUP011945 Lucilia cuprina LCUP011945 I 0.713
LLOJ002076 Lutzomyia longipalpis LLOJ002076 I 0.720
LLOJ000106 Lutzomyia longipalpis LLOJ000106 I 0.760
ENSP00000350844 Macaca fascicularis ENSP00000350844 I 0.712
MESCA003563 Megaselia scalaris MESCA003563 I 0.712
PAX5 Microcebus murinus ENSMICG00000017679 I 0.712
PAX5 Monodelphis domestica ENSMODG00000002720 I 0.712
MDOA010966 Musca domestica MDOA010966 I 0.776
ENSMPUG00000006012 Mustela putorius furo ENSMPUG00000006012 I 0.712
Pax5 Mus musculus ENSMUSG00000014030 D 0.712
Myotis_brandtii_PAX5_10017827 Myotis brandtii Myotis_brandtii_PAX5_10017827 I 0.712
PAX5 Myotis lucifugus ENSMLUG00000012652 I 0.712
NV12756 Nasonia vitripennis NV12756 I 0.792
ENSNLEG00000003664 Nomascus leucogenys ENSNLEG00000003664 I 0.712
PAX5 Ochotona princeps ENSOPRG00000000734 I 0.712
Ocbimv22007526m.g Octopus bimaculoides Ocbimv22007526m.g I 0.712
Ocbimv22007901m.g Octopus bimaculoides Ocbimv22007901m.g I 0.760
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.727
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.712
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I 0.712
PAX5 Ornithorhynchus anatinus ENSOANG00000007579 I 0.712
PAX5 Oryctolagus cuniculus ENSOCUG00000012281 I 0.712
pax2b Oryzias latipes ENSORLG00000009321 I 0.704
ENSOGAG00000004773 Otolemur garnettii ENSOGAG00000004773 I 0.712
ENSOARG00000011518 Ovis aries ENSOARG00000011518 I 0.712
PAX5 Pan troglodytes ENSPTRG00000020936 I 0.712
ENSPANG00000025475 Papio anubis ENSPANG00000025475 I 0.712
ENSPSIG00000003215 Pelodiscus sinensis ENSPSIG00000003215 I 0.704
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I 0.712
ENSPFOG00000022164 Poecilia formosa ENSPFOG00000022164 I 0.704
ENSPFOG00000011719 Poecilia formosa ENSPFOG00000011719 I 0.704
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.712
Pvit_15554 Pogona vitticeps Pvit_15554 I 0.712
ENSPPYG00000019064 Pongo abelii ENSPPYG00000019064 I 0.712
PAX5 Procavia capensis ENSPCAG00000004660 I 0.712
PAX5 Pteropus vampyrus ENSPVAG00000000054 I 0.712
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.712
Sakowv30025789m.g Saccoglossus kowalevskii Sakowv30025789m.g I 0.752
ENSSHAG00000012375 Sarcophilus harrisii ENSSHAG00000012375 I 0.704
SMAR001091 Strigamia maritima SMAR001091 I 0.776
SPU_027334 Strongylocentrotus purpuratus SPU_027334 I 0.736
ENSSSCG00000005345 Sus scrofa ENSSSCG00000005345 I 0.712
PAX5 Taeniopygia guttata ENSTGUG00000007215 I 0.712
pax5 Takifugu rubripes ENSTRUG00000003227 I 0.704
pax2a Takifugu rubripes ENSTRUG00000008891 I 0.712
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.720
ENSTSYG00000001117 Tarsius syrichta ENSTSYG00000001117 I 0.712
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.704
ENSTNIG00000005391 Tetraodon nigroviridis ENSTNIG00000005391 I 0.712
TC003570 Tribolium castaneum TC003570 I 0.704
TC008672 Tribolium castaneum TC008672 I 0.752
pax5.L Xenopus laevis XB-GENE-865318 I 0.704
pax2.L Xenopus laevis XB-GENE-486805 I 0.712
XP_002935920 Xenopus tropicalis XP_002935920 I 0.712
pax2 Xenopus tropicalis XB-GENE-486801 D 0.712
ENSXMAG00000003038 Xiphophorus maculatus ENSXMAG00000003038 I 0.704
ENSXMAG00000012680 Xiphophorus maculatus ENSXMAG00000012680 I 0.704