Ogr05570 (Ophisaurus gracilis)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 Ogr05570 T312169_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX8
M05685_2.00 		Homo sapiens
NRNBYRNYSRWGCGTGACSN
NSGTCACGCWYSRNYRVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX 		0.747 0.747
Pax8
M09624_2.00 		Rattus norvegicus
BCAGBCADSCRKGVM
KBCMYGSHTGVCTGV		 Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938 		0.747 0.747
PAX8
M11205_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_01 		0.747 0.747
PAX8
M11206_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_B 		0.747 0.747
PAX8
M05686_2.00 		Homo sapiens
NRNBCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX 		0.747 0.747
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr05570 Paired box 110 188

Links

Other Paired box family TFs
Other Ophisaurus gracilis TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10002921 Chelonia mydas Cmyd_10002921 I 1.000
PAX8 Vicugna pacos ENSVPAG00000003973 I 0.981
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.927
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.927
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.927
Sjc_0077510 Schistosoma japonicum Sjc_0077510 I 0.857
SBAD_0001213701 Soboliphyme baturini SBAD_0001213701 I 0.839
PAX5 Homo sapiens ENSG00000196092 D 0.797
Pax5 Mus musculus ENSMUSG00000014030 D 0.797
PAX5 Callithrix jacchus ENSCJAG00000010379 I 0.797
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.795
augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0 I 0.765
BGLB002028 Biomphalaria glabrata BGLB002028 I 0.750
PAX8 Microcebus murinus ENSMICG00000003265 I 0.747
PAX8 Ochotona princeps ENSOPRG00000012910 I 0.747
PAX8 Pan troglodytes ENSPTRG00000012380 I 0.747
DAPPUDRAFT_38922 Daphnia pulex DAPPUDRAFT_38922 I 0.741
ENSTNIG00000013141 Tetraodon nigroviridis ENSTNIG00000013141 I 0.737
LCUP015670 Lucilia cuprina LCUP015670 I 0.732
RPRC001910 Rhodnius prolixus RPRC001910 I 0.729
LCUP013028 Lucilia cuprina LCUP013028 I 0.727
PAX5 Macaca mulatta ENSMMUG00000019639 I 0.726
ANCCAN_01421 Ancylostoma caninum ANCCAN_01421 I 0.720
HPBE_0000479901 Heligmosomoides bakeri HPBE_0000479901 I 0.710
LotgiG135549 Lottia gigantea LotgiG135549 I 0.709
pax8 Gasterosteus aculeatus ENSGACG00000016747 I 0.709
pax8 Danio rerio ENSDARG00000015879 I 0.709