TTAC_0001098501 (Hydatigera taeniaeformis)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 TTAC_0001098501 T313009_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN

NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.711 0.711
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM

KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.711 0.711
PAX8
M11205_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.711 0.711
PAX8
M11206_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.711 0.711
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN

NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTAC_0001098501-mRNA-1 Paired box 4 81

Links

Other Paired box family TFs
Other Hydatigera taeniaeformis TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZFP5 Arabidopsis thaliana AT1G10480 D 0.000
Carubv10018785m.g Capsella rubella Carubv10018785m.g I 0.000
Carubv10002570m.g Capsella rubella Carubv10002570m.g I 0.000
Cagra.3166s0007 Capsella grandiflora Cagra.3166s0007 I 0.000
Bostr.2902s0137 Boechera stricta Bostr.2902s0137 I 0.000
Bostr.13671s0437 Boechera stricta Bostr.13671s0437 I 0.000
cassava45710.m1 Manihot esculenta cassava45710.m1 I 0.000
30076.m004693 Ricinus communis 30076.m004693 I 0.000
Pm008291 Prunus mume Pm008291 I 0.000
Traes_5DL_DD8A0F6BE Triticum aestivum Traes_5DL_DD8A0F6BE I 0.000
evm.TU.supercontig_1307.1 Carica papaya evm.TU.supercontig_1307.1 I 0.000
gene05263-v1.0-hybrid Fragaria vesca gene05263-v1.0-hybrid I 0.000
Lus10017229.g Linum usitatissimum Lus10017229.g I 0.000
chr5.LjT04G07.90.nd Lotus japonicus chr5.LjT04G07.90.nd I 0.000
Thhalv10015891m.g Eutrema salsugineum Thhalv10015891m.g I 0.000
Thhalv10008773m.g Eutrema salsugineum Thhalv10008773m.g I 0.000
SapurV1A.0052s0050 Salix purpurea SapurV1A.0052s0050 I 0.000
Pavir.Ib01803 Panicum virgatum Pavir.Ib01803 I 0.000
Pavir.Ia03096 Panicum virgatum Pavir.Ia03096 I 0.000
MDP0000166683 Malus domestica MDP0000166683 I 0.000
MDP0000165710 Malus domestica MDP0000165710 I 0.000
MDP0000121370 Malus domestica MDP0000121370 I 0.000
Solyc10g078990.1 Solanum lycopersicum Solyc10g078990.1 I 0.000
Solyc10g078970.1 Solanum lycopersicum Solyc10g078970.1 I 0.000
F775_42450 Aegilops tauschii F775_42450 I 0.000
Bra008787 Brassica rapa Bra008787 I 0.000
GRMZM2G161255 Zea mays GRMZM2G161255 I 0.000
GRMZM2G703281 Zea mays GRMZM2G703281 I 0.000
Bo9g166240 Brassica oleracea Bo9g166240 I 0.000
PGSC0003DMG400011450 Solanum tuberosum PGSC0003DMG400011450 I 0.000
SELMODRAFT_405785 Selaginella moellendorffii SELMODRAFT_405785 I 0.000
SELMODRAFT_450813 Selaginella moellendorffii SELMODRAFT_450813 I 0.000
Bo9g011450 Brassica oleracea Bo9g011450 I 0.000
SELMODRAFT_450817 Selaginella moellendorffii SELMODRAFT_450817 I 0.000
SELMODRAFT_450828 Selaginella moellendorffii SELMODRAFT_450828 I 0.000
SELMODRAFT_450830 Selaginella moellendorffii SELMODRAFT_450830 I 0.000
SELMODRAFT_450832 Selaginella moellendorffii SELMODRAFT_450832 I 0.000
SELMODRAFT_450839 Selaginella moellendorffii SELMODRAFT_450839 I 0.000
Bo8g109510 Brassica oleracea Bo8g109510 I 0.000
Si037914m.g Setaria italica Si037914m.g I 0.000
BRADI4G37760 Brachypodium distachyon BRADI4G37760 I 0.000
Bra020571 Brassica rapa Bra020571 N 0.000
fgenesh2_kg.6__2677__AT5G27880.1 Arabidopsis lyrata fgenesh2_kg.6__2677__AT5G27880.1 N 0.000
MTR_2g067740 Medicago truncatula MTR_2g067740 N 0.000
Bostr.29827s0107 Boechera stricta Bostr.29827s0107 N 0.000
Ca_23376 Cicer arietinum Ca_23376 N 0.000
Bo2g155500 Brassica oleracea Bo2g155500 N 0.000