CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTAC_0001098501
(
Hydatigera taeniaeformis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
TTAC_0001098501
T313009_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN
NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.711
0.711
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM
KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.711
0.711
PAX8
M11205_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.711
0.711
PAX8
M11206_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.711
0.711
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.711
0.711
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTAC_0001098501-mRNA-1
Paired box
4
81
SADISGVCRYNETGSIRPGVIGGSKPKVATPQVVEAIHRYKSETPTMFAWEIRDRLEKDGICTQETLPSVSSINRIVR
Links
Other
Paired box
family TFs
Other
Hydatigera taeniaeformis
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EmuJ_000447000
Echinococcus multilocularis
EmuJ_000447000
I
0.921
ECANG7_01924
Echinococcus canadensis
ECANG7_01924
I
0.921
DILT_0001709501
Diphyllobothrium latum
DILT_0001709501
I
0.789
SCUD_0002110701
Schistosoma curassoni
SCUD_0002110701
I
0.763
SMRZ_0001886701
Schistosoma margrebowiei
SMRZ_0001886701
I
0.763
Smp_142940
Schistosoma mansoni
Smp_142940
I
0.763
SPER_0000498301
Spirometra erinaceieuropaei
SPER_0000498301
I
0.763
SSLN_0001596201
Schistocephalus solidus
SSLN_0001596201
I
0.763
SROB_0000566701
Schistosoma rodhaini
SROB_0000566701
I
0.763
ENSPSIG00000012152
Pelodiscus sinensis
ENSPSIG00000012152
I
0.757
csin100153
Clonorchis sinensis
csin100153
I
0.737
D915_05650
Fasciola hepatica
D915_05650
N
0.737
Sjc_0065980
Schistosoma japonicum
Sjc_0065980
I
0.737
pax2/5/8-b
Ciona intestinalis
ENSCING00000005977
I
0.737
A_06244
Schistosoma haematobium
A_06244
N
0.737
tetur29g01000
Tetranychus urticae
tetur29g01000
I
0.724
pax8.L
Xenopus laevis
XB-GENE-865008
I
0.724
TRE_0001207401
Trichobilharzia regenti
TRE_0001207401
I
0.724
ENSCSAVG00000001640
Ciona savignyi
ENSCSAVG00000001640
I
0.724
pax8
Xenopus tropicalis
XB-GENE-483693
I
0.719
PAX8
Tupaia belangeri
ENSTBEG00000008679
I
0.711
GJ13730
Drosophila virilis
FBgn0200951
I
0.711
GK13586
Drosophila willistoni
FBgn0215594
I
0.711
GL18401
Drosophila persimilis
FBgn0156002
I
0.711
GI14046
Drosophila mojavensis
FBgn0136800
I
0.711
PAX8
Tursiops truncatus
ENSTTRG00000011948
I
0.711
GF20618
Drosophila ananassae
FBgn0097624
I
0.711
GH23966
Drosophila grimshawi
FBgn0131423
I
0.711
spa-sv
Drosophila pseudoobscura
FBgn0249275
I
0.711
MESCA003563
Megaselia scalaris
MESCA003563
I
0.711
ENSP00000395498
Macaca fascicularis
ENSP00000395498
I
0.711
Myotis_brandtii_Pax8_10002304
Myotis brandtii
Myotis_brandtii_Pax8_10002304
I
0.711
L892_g26455
Steinernema scapterisci
L892_g26455
I
0.711
ENSP00000263334-D1
Bos grunniens
ENSP00000263334-D1
I
0.711
Alligator_sinensis_CCG013279.1
Alligator sinensis
Alligator_sinensis_CCG013279.1
I
0.711
TC003570
Tribolium castaneum
TC003570
I
0.711
L893_g8856
Steinernema glaseri
L893_g8856
I
0.711
LLOJ002076
Lutzomyia longipalpis
LLOJ002076
I
0.711
ENSSSCG00000021332
Sus scrofa
ENSSSCG00000021332
I
0.711
PAX8
Loxodonta africana
ENSLAFG00000021590
I
0.711
ENSLACG00000003762
Latimeria chalumnae
ENSLACG00000003762
I
0.711
PAX8
Gorilla gorilla
ENSGGOG00000004587
I
0.711
ENSMEUG00000013983
Macropus eugenii
ENSMEUG00000013983
I
0.711
PAX8
Myotis lucifugus
ENSMLUG00000011936
I
0.711
PAX8
Monodelphis domestica
ENSMODG00000013770
I
0.711
PAX8
Macaca mulatta
ENSMMUG00000011578
I
0.711
PAX8
Homo sapiens
ENSG00000125618
D
0.711
PAX8
Felis catus
ENSFCAG00000009580
I
0.711
PAX8
Callithrix jacchus
ENSCJAG00000013889
I
0.711
PAX8
Canis familiaris
ENSCAFG00000007309
I
0.711
PAX8
Bos taurus
ENSBTAG00000019354
I
0.711
PAX8
Cavia porcellus
ENSCPOG00000012011
I
0.711
ENSCSAG00000016682
Chlorocebus sabaeus
ENSCSAG00000016682
I
0.711
PAX8
Erinaceus europaeus
ENSEEUG00000003041
I
0.711
Pax8
Dipodomys ordii
ENSDORG00000002606
I
0.711
ENSMPUG00000009512
Mustela putorius furo
ENSMPUG00000009512
I
0.711
Pax8
Mus musculus
ENSMUSG00000026976
I
0.711
ENSPPYG00000012184
Pongo abelii
ENSPPYG00000012184
I
0.711
ENSPFOG00000003702
Poecilia formosa
ENSPFOG00000003702
I
0.711
PAX8
Procavia capensis
ENSPCAG00000005498
I
0.711
PAX8
Pteropus vampyrus
ENSPVAG00000005666
I
0.711
Pax8
Rattus norvegicus
ENSRNOG00000026203
D
0.711
ENSAMEG00000010662
Ailuropoda melanoleuca
ENSAMEG00000010662
I
0.711
ENSSHAG00000011845
Sarcophilus harrisii
ENSSHAG00000011845
I
0.711
ENSPANG00000016994
Papio anubis
ENSPANG00000016994
I
0.711
pax2b
Oryzias latipes
ENSORLG00000009321
I
0.711
PAX8
Ornithorhynchus anatinus
ENSOANG00000010554
I
0.711
ENSNLEG00000002157
Nomascus leucogenys
ENSNLEG00000002157
I
0.711
ENSOARG00000020812
Ovis aries
ENSOARG00000020812
I
0.711
PAX8
Oryctolagus cuniculus
ENSOCUG00000004187
I
0.711
ENSONIG00000016065
Oreochromis niloticus
ENSONIG00000016065
I
0.711
PAX8
Otolemur garnettii
ENSOGAG00000009418
I
0.711
ENSSTOG00000024664
Ictidomys tridecemlineatus
ENSSTOG00000024664
I
0.711