TTRE_0000074901 (Trichuris trichiura)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 TTRE_0000074901 T313010_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX9
M03444_2.00 		Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN		 SELEX
Jolma et al.(2013)
PAX9_1 		0.793 0.793
PAX9
M05689_2.00 		Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV		 SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX 		0.793 0.793
PAX9
M05690_2.00 		Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV		 SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX 		0.793 0.793
PAX1
M03442_2.00 		Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH		 SELEX
Jolma et al.(2013)
PAX1_1 		0.785 0.785
Poxm
M03944_2.00 		Drosophila melanogaster
CAVTCAWGCGTGACR
YGTCACGCWTGABTG		 SELEX
Nitta et al.(2015)
Poxm_1 		0.785 0.785
Poxm
M03945_2.00 		Drosophila melanogaster
NYSAWGCRTRACS
SGTYAYGCWTSRN		 SELEX
Nitta et al.(2015)
Poxm_2 		0.785 0.785
PAX1
M05687_2.00 		Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX 		0.785 0.785
Poxm
M06436_2.00 		Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA
TCAYGSNYNDNBKNNNNNN		 B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129 		0.785 0.785
PAX1
M11207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX1_B 		0.785 0.785
pax9
M11204_2.00 		Danio rerio Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX9_B 		0.785 0.785
PAX1
M05688_2.00 		Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX 		0.785 0.785
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTRE_0000074901 Paired box 1 121

Links

Other Paired box family TFs
Other Trichuris trichiura TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TMUE_s0003015350 Trichuris muris TMUE_s0003015350 I 0.872
D917_06071 Trichinella nativa D917_06071 I 0.804
PAX9 Homo sapiens ENSG00000198807 D 0.793
Pax9 Rattus norvegicus ENSRNOG00000008826 I 0.793
PAX9 Pan troglodytes ENSPTRG00000006281 I 0.793
ENSPSIG00000010961 Pelodiscus sinensis ENSPSIG00000010961 I 0.793
PAX9 Gorilla gorilla ENSGGOG00000001528 I 0.793
PAX9 Sorex araneus ENSSARG00000000337 I 0.793
PAX9 Gallus gallus ENSGALG00000010114 I 0.793
ENSFALG00000006155 Ficedula albicollis ENSFALG00000006155 I 0.793
PAX9 Equus caballus ENSECAG00000023712 I 0.793
ENSSSCG00000001943 Sus scrofa ENSSSCG00000001943 I 0.793
ENSNLEG00000003346 Nomascus leucogenys ENSNLEG00000003346 I 0.793
PAX9 Echinops telfairi ENSETEG00000002086 I 0.793
ENSPPYG00000005755 Pongo abelii ENSPPYG00000005755 I 0.793
PAX9 Felis catus ENSFCAG00000001024 I 0.793
PAX9 Loxodonta africana ENSLAFG00000017541 I 0.793
PAX9 Ornithorhynchus anatinus ENSOANG00000014065 I 0.793
PAX9 Macaca mulatta ENSMMUG00000009648 I 0.793
PAX9 Monodelphis domestica ENSMODG00000012681 I 0.793
ENSMPUG00000016259 Mustela putorius furo ENSMPUG00000016259 I 0.793
Pax9 Mus musculus ENSMUSG00000001497 I 0.793
ENSOARG00000008050 Ovis aries ENSOARG00000008050 I 0.793
PAX9 Myotis lucifugus ENSMLUG00000011407 I 0.793
ENSMEUG00000002095 Macropus eugenii ENSMEUG00000002095 I 0.793
PAX9 Dasypus novemcinctus ENSDNOG00000000352 I 0.793
ENSOGAG00000013131 Otolemur garnettii ENSOGAG00000013131 I 0.793
PAX9 Meleagris gallopavo ENSMGAG00000012530 I 0.793
PAX9 Microcebus murinus ENSMICG00000010808 I 0.793
ENSPANG00000000932 Papio anubis ENSPANG00000000932 I 0.793
ENSSHAG00000005531 Sarcophilus harrisii ENSSHAG00000005531 I 0.793
Afo_R004464 Aptenodytes forsteri Afo_R004464 I 0.793
PAX9 Bos taurus ENSBTAG00000009186 I 0.793
Aan_R005718 Calypte anna Aan_R005718 I 0.793
PAX9 Canis familiaris ENSCAFG00000013690 I 0.793
ENSAPLG00000012856 Anas platyrhynchos ENSAPLG00000012856 I 0.793
DAPPUDRAFT_307722 Daphnia pulex DAPPUDRAFT_307722 I 0.793
ENSAMEG00000002906 Ailuropoda melanoleuca ENSAMEG00000002906 I 0.793
ENSP00000384817-D1 Bos grunniens ENSP00000384817-D1 I 0.793
ENSACAG00000001481 Anolis carolinensis ENSACAG00000001481 I 0.793
Ogr19508 Ophisaurus gracilis Ogr19508 I 0.793
ENSP00000355245 Macaca fascicularis ENSP00000355245 I 0.793
Pvit_17942 Pogona vitticeps Pvit_17942 I 0.793
ENSCSAG00000015463 Chlorocebus sabaeus ENSCSAG00000015463 I 0.793
PAX9 Taeniopygia guttata ENSTGUG00000012015 I 0.793
PAX9 Tupaia belangeri ENSTBEG00000002460 I 0.793
ENSSTOG00000015730 Ictidomys tridecemlineatus ENSSTOG00000015730 I 0.793
pax9 Xenopus tropicalis XB-GENE-482238 I 0.793
MDOA001030 Musca domestica MDOA001030 I 0.793
pax9.L Xenopus laevis XB-GENE-864845 I 0.793
PAX9 Callithrix jacchus ENSCJAG00000016460 I 0.793
PAX9 Cavia porcellus ENSCPOG00000010951 I 0.793
ENSP00000381499 Macaca fascicularis ENSP00000381499 I 0.785
PAX1 Ornithorhynchus anatinus ENSOANG00000002008 I 0.785
PAX1 Oryctolagus cuniculus ENSOCUG00000003276 I 0.785
ENSOARG00000004951 Ovis aries ENSOARG00000004951 I 0.785
ENSNLEG00000010049 Nomascus leucogenys ENSNLEG00000010049 I 0.785
PAX1 Procavia capensis ENSPCAG00000003556 I 0.785
ENSXMAG00000015762 Xiphophorus maculatus ENSXMAG00000015762 I 0.785
PAX1 Pan troglodytes ENSPTRG00000013311 I 0.785
PAX1 Tursiops truncatus ENSTTRG00000002444 I 0.785
pax9 Takifugu rubripes ENSTRUG00000011965 I 0.785
PAX1 Sus scrofa ENSSSCG00000007112 I 0.785
pax9 Tetraodon nigroviridis ENSTNIG00000019284 I 0.785
ENSPPYG00000010758 Pongo abelii ENSPPYG00000010758 I 0.785
ENSPFOG00000017550 Poecilia formosa ENSPFOG00000017550 I 0.785
ENSBTAP00000008861-D1 Bos grunniens ENSBTAP00000008861-D1 I 0.785
ENSONIG00000000990 Oreochromis niloticus ENSONIG00000000990 I 0.785
PAX1 Ochotona princeps ENSOPRG00000017249 I 0.785
Alligator_sinensis_CCG004503.1 Alligator sinensis Alligator_sinensis_CCG004503.1 I 0.785
ENSSTOG00000003000 Ictidomys tridecemlineatus ENSSTOG00000003000 I 0.785
ENSPANG00000008282 Papio anubis ENSPANG00000008282 I 0.785
PAX1 Otolemur garnettii ENSOGAG00000033162 I 0.785
ENSSHAG00000017556 Sarcophilus harrisii ENSSHAG00000017556 I 0.785
Pax1 Dipodomys ordii ENSDORG00000016051 I 0.785
PAX1 Dasypus novemcinctus ENSDNOG00000033546 I 0.785
pax9 Danio rerio ENSDARG00000053829 D 0.785
PAX1 Erinaceus europaeus ENSEEUG00000007846 I 0.785
PAX1 Homo sapiens ENSG00000125813 D 0.785
PAX1 Gorilla gorilla ENSGGOG00000016075 I 0.785
ENSGALG00000028576 Gallus gallus ENSGALG00000028576 I 0.785
pax9 Gasterosteus aculeatus ENSGACG00000011298 I 0.785
ENSCSAG00000011068 Chlorocebus sabaeus ENSCSAG00000011068 I 0.785
PAX1 Cavia porcellus ENSCPOG00000002886 I 0.785
PAX1 Bos taurus ENSBTAG00000006742 I 0.785
PAX1 Canis familiaris ENSCAFG00000005170 I 0.785
Pax1 Mus musculus ENSMUSG00000037034 I 0.785
ENSAMXG00000002161 Astyanax mexicanus ENSAMXG00000002161 I 0.785
ENSAMEG00000012642 Ailuropoda melanoleuca ENSAMEG00000012642 I 0.785
ENSACAG00000010563 Anolis carolinensis ENSACAG00000010563 I 0.785
PAX1 Callithrix jacchus ENSCJAG00000005773 I 0.785
ENSGMOG00000009128 Gadus morhua ENSGMOG00000009128 I 0.785
PAX1 Felis catus ENSFCAG00000004293 I 0.785
ENSMEUG00000010140 Macropus eugenii ENSMEUG00000010140 I 0.785
ENSLOCG00000013992 Lepisosteus oculatus ENSLOCG00000013992 I 0.785
PAX1 Myotis lucifugus ENSMLUG00000014710 I 0.785
ENSMPUG00000001187 Mustela putorius furo ENSMPUG00000001187 I 0.785
PAX1 Monodelphis domestica ENSMODG00000006198 I 0.785
PAX1 Macaca mulatta ENSMMUG00000019409 I 0.785
Ocbimv22010462m.g Octopus bimaculoides Ocbimv22010462m.g I 0.784
EFV54842 Trichinella spiralis EFV54842 I 0.779
PAX9 Pteropus vampyrus ENSPVAG00000003728 I 0.778
pax1a Tetraodon nigroviridis ENSTNIG00000016891 I 0.777
ENSXMAG00000019114 Xiphophorus maculatus ENSXMAG00000019114 I 0.777
pax1a Takifugu rubripes ENSTRUG00000008079 I 0.777
pax1a Danio rerio ENSDARG00000008203 I 0.777
ENSAMXG00000018287 Astyanax mexicanus ENSAMXG00000018287 I 0.777
PAX1 Microcebus murinus ENSMICG00000016968 I 0.777
ENSONIG00000008137 Oreochromis niloticus ENSONIG00000008137 I 0.777
pax1a Gasterosteus aculeatus ENSGACG00000006987 I 0.777
LotgiG161614 Lottia gigantea LotgiG161614 I 0.777
pax1 Xenopus tropicalis XB-GENE-487951 I 0.777
ENSPFOG00000003208 Poecilia formosa ENSPFOG00000003208 I 0.777
pax1 Oryzias latipes ENSORLG00000017412 I 0.777
ENSPMAG00000010414 Petromyzon marinus ENSPMAG00000010414 I 0.777
ENSPMAG00000010308 Petromyzon marinus ENSPMAG00000010308 I 0.776
AFUN001734 Anopheles funestus AFUN001734 I 0.775
ASIS022893 Anopheles sinensis ASIS022893 I 0.775
estExt_fgenesh2_pg.C_420056 Branchiostoma floridae estExt_fgenesh2_pg.C_420056 I 0.769
PAX9 Oryctolagus cuniculus ENSOCUG00000014321 I 0.769
YQE_12494 Dendroctonus ponderosae YQE_12494 I 0.768
ENSLACG00000015921 Latimeria chalumnae ENSLACG00000015921 I 0.768
LLOJ004809 Lutzomyia longipalpis LLOJ004809 I 0.765
HMEL004481 Heliconius melpomene HMEL004481 I 0.760
PHUM515110 Pediculus humanus PHUM515110 I 0.760
TC008838 Tribolium castaneum TC008838 I 0.760
SMAR007866 Strigamia maritima SMAR007866 I 0.760
CGI_10005222 Crassostrea gigas CGI_10005222 I 0.760
BGIBMGA000787 Bombyx mori BGIBMGA000787 I 0.760
LCUP007799 Lucilia cuprina LCUP007799 I 0.760
HHAL005838-PA Halyomorpha halys HHAL005838-PA I 0.760
GE24855 Drosophila yakuba FBgn0241954 I 0.760
CLEC012019 Cimex lectularius CLEC012019 I 0.760
Sakowv30044183m.g Saccoglossus kowalevskii Sakowv30044183m.g I 0.760
KGM_09724 Danaus plexippus KGM_09724 I 0.760
Poxm Drosophila melanogaster FBgn0003129 D 0.760
GK14101 Drosophila willistoni FBgn0216107 I 0.760
GF16668 Drosophila ananassae FBgn0093689 I 0.760
GG17455 Drosophila erecta FBgn0109681 I 0.760
ENSTNIG00000002104 Tetraodon nigroviridis ENSTNIG00000002104 I 0.760
ENSLACG00000009610 Latimeria chalumnae ENSLACG00000009610 I 0.760
PAX1 Pteropus vampyrus ENSPVAG00000002604 I 0.760
ACEP27324 Atta cephalotes ACEP27324 I 0.760
pax1b Danio rerio ENSDARG00000073814 I 0.760
ENSTGUG00000007526 Taeniopygia guttata ENSTGUG00000007526 I 0.760
GH17421 Drosophila grimshawi FBgn0124891 I 0.760
GA21910 Drosophila pseudoobscura FBgn0081895 I 0.760
GI22750 Drosophila mojavensis FBgn0145477 I 0.760
GM26349 Drosophila sechellia FBgn0181202 I 0.760
GJ22751 Drosophila virilis FBgn0209855 I 0.760
GL24118 Drosophila persimilis FBgn0161708 I 0.760
PAX1 Loxodonta africana ENSLAFG00000008908 I 0.758
ADAC006866 Anopheles darlingi ADAC006866 I 0.752
pax1.S Xenopus laevis XB-GENE-865751 I 0.752
AALB006349 Anopheles albimanus AALB006349 I 0.752
ASTEI07741 Anopheles stephensi ASTEI07741 I 0.752
ENSLOCG00000016871 Lepisosteus oculatus ENSLOCG00000016871 I 0.752
ENSGMOG00000018913 Gadus morhua ENSGMOG00000018913 I 0.752
AARA001070 Anopheles arabiensis AARA001070 I 0.752
AGAP001493 Anopheles gambiae AGAP001493 I 0.752
ACUA000500 Anopheles culicifacies ACUA000500 I 0.752
AMAM000649 Anopheles maculatus AMAM000649 I 0.752
AMIN005066 Anopheles minimus AMIN005066 I 0.752
AMEC017516 Anopheles melas AMEC017516 I 0.752
AQUA002471 Anopheles quadriannulatus AQUA002471 I 0.752
AFAF006072 Anopheles farauti AFAF006072 I 0.752
AMEM000130 Anopheles merus AMEM000130 I 0.752
ADIR000995 Anopheles dirus ADIR000995 I 0.752
AEPI005638 Anopheles epiroticus AEPI005638 I 0.752
AATE019429 Anopheles atroparvus AATE019429 I 0.752
ENSGMOG00000017053 Gadus morhua ENSGMOG00000017053 I 0.752
SINV15629 Solenopsis invicta SINV15629 I 0.752
ENSAMXG00000008583 Astyanax mexicanus ENSAMXG00000008583 I 0.752
Cmyd_10010133 Chelonia mydas Cmyd_10010133 I 0.752
Cflo_08772--XP_001121954.1_APIME Camponotus floridanus Cflo_08772--XP_001121954.1_APIME I 0.752
NV11293 Nasonia vitripennis NV11293 I 0.752
Ogr18451 Ophisaurus gracilis Ogr18451 I 0.752
GB52620 Apis mellifera GB52620 I 0.752
BGLB008429 Biomphalaria glabrata BGLB008429 I 0.748
SBAD_0000488901 Soboliphyme baturini SBAD_0000488901 I 0.748
PEQ_0000430901 Parascaris equorum PEQ_0000430901 I 0.745
LLOJ004808 Lutzomyia longipalpis LLOJ004808 I 0.744
TCNE_0001785701 Toxocara canis TCNE_0001785701 I 0.744
PPAI009002 Phlebotomus papatasi PPAI009002 I 0.744
ENSONIG00000018717 Oreochromis niloticus ENSONIG00000018717 I 0.744
ACYPI005583 Acyrthosiphon pisum ACYPI005583 I 0.744
ENSCSAVG00000007806 Ciona savignyi ENSCSAVG00000007806 I 0.744
SPU_006683 Strongylocentrotus purpuratus SPU_006683 I 0.744
ENSCING00000024971 Ciona intestinalis ENSCING00000024971 I 0.736
RPRC009438 Rhodnius prolixus RPRC009438 I 0.733
ISCW011634 Ixodes scapularis ISCW011634 I 0.728
L893_g11572 Steinernema glaseri L893_g11572 I 0.727
L898_g3148 Steinernema monticolum L898_g3148 I 0.727
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.727
Gfo_R012945 Geospiza fortis Gfo_R012945 I 0.727
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.727
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.727
PAX8 Vicugna pacos ENSVPAG00000003973 I 0.722
L889_g19368 Steinernema feltiae L889_g19368 I 0.720
ASU_08322 Ascaris suum ASU_08322 I 0.720
ALUE_0000964501 Ascaris lumbricoides ALUE_0000964501 I 0.720
ANCCEY_02265 Ancylostoma ceylanicum ANCCEY_02265 I 0.719
HelroG89496 Helobdella robusta HelroG89496 I 0.715
SBAD_0001213701 Soboliphyme baturini SBAD_0001213701 I 0.714
CapteG64892 Capitella teleta CapteG64892 I 0.712
L596_g23601 Steinernema carpocapsae L596_g23601 I 0.712
L892_g31296 Steinernema scapterisci L892_g31296 I 0.712
MESCA000247 Megaselia scalaris MESCA000247 I 0.707
DICVIV_10778 Dictyocaulus viviparus DICVIV_10778 I 0.704
tetur29g01000 Tetranychus urticae tetur29g01000 I 0.702
SMUV_0000337801 Syphacia muris SMUV_0000337801 I 0.702
ACAC_0001249001 Angiostrongylus cantonensis ACAC_0001249001 I 0.702