LCORL (Takifugu rubripes)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSTRUG00000013582 T313630_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000034690 Pipsqueak 259 294
ENSTRUP00000034690 Pipsqueak 504 549
ENSTRUP00000034692 Pipsqueak 180 215
ENSTRUP00000034692 Pipsqueak 425 470

Links

Other Pipsqueak family TFs
Other Takifugu rubripes TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LCORL Tetraodon nigroviridis ENSTNIG00000004634 N 0.950
LCORL Gasterosteus aculeatus ENSGACG00000016201 N 0.924
ENSPFOG00000008607 Poecilia formosa ENSPFOG00000008607 N 0.900
ENSONIG00000009039 Oreochromis niloticus ENSONIG00000009039 N 0.890
ENSGMOG00000016158 Gadus morhua ENSGMOG00000016158 N 0.887
ENSXMAG00000009809 Xiphophorus maculatus ENSXMAG00000009809 N 0.875