fgenesh_scip_prom.46568.1708 (Phytophthora kernoviae)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 fgenesh_scip_prom.46568.1708 T313760_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra78816
M02437_2.00 		Phytophthora ramorum
NNYRNWACAN
NTGTWNYRNN		 PBM
Weirauch et al.(2014)
pTH7817 		0.854 0.854
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh_scip_prom.46568.1708 Pipsqueak 255 296

Links

Other Pipsqueak family TFs
Other Phytophthora kernoviae TFs

Invalid Input OrderBy

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action