mbr-1 (Caenorhabditis elegans)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 WBGene00011315 T314398_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mbr-1
M00707_2.00		 Caenorhabditis elegans
NRNGGGCCDN
NHGGCCCNYN		 PBM
Narasimhan et al.(2015)
pTH10031		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.778 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00707_2.00 Pipsqueak 51 93

DNA Binding Domains

Protein ID Domain From To Sequence
T01C1.2 Pipsqueak 155 197

Links

Other Pipsqueak family TFs
Other Caenorhabditis elegans TFs

Invalid Input OrderBy

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action