CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DICVIV_12442
(
Dictyocaulus viviparus
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
DICVIV_12442
T315022_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nasonia_NCBI_hmm1312624
M02436_2.00
Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN
PBM
Weirauch et al.(2014)
pTH9266
0.795
0.795
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DICVIV_12442
Pipsqueak
24
68
DKNALDEAVRSVRRGEMSVHRAGSYYGVPHSTLEYKVKERNLLRK
Links
Other
Pipsqueak
family TFs
Other
Dictyocaulus viviparus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy