CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
HCOI02128500
(
Haemonchus contortus
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05044 (HPD)
IPR007738
HCOI02128500
T316748_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pros-1
M00708_2.00
Caenorhabditis elegans
NNBRAGRHDN
NHDYCTYVNN
PBM
Narasimhan et al.(2015)
pTH9164
0.918
0.918
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI02128500.t1
Prospero
466
514
TLTPVHLRKAKLMFFYTRYPNSTLLKSYFPDVRFNKNNTAQLVKWFSNF
Links
Other
Prospero
family TFs
Other
Haemonchus contortus
TFs
134 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.10327
Phytophthora lateralis
fgenesh_scip_prom.28083.10327
N
0.000
PYU1_G012263
Pythium ultimum
PYU1_G012263
N
0.000
PITG_15534
Phytophthora infestans
PITG_15534
N
0.000
Phyra82861
Phytophthora ramorum
Phyra82861
N
0.000
maker-pve_contig_724-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_724-fgenesh-gene-0.3
N
0.000
maker-piw_contig_429-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_429-fgenesh-gene-0.2
N
0.000
maker-pir_contig_3974-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_3974-fgenesh-gene-0.0
N
0.000
maker-pag1_scaffold_328-fgenesh-gene-0.3
Pythium aphanidermatum
maker-pag1_scaffold_328-fgenesh-gene-0.3
N
0.000
maker-pag1_scaffold_1039-fgenesh-gene-0.1
Pythium aphanidermatum
maker-pag1_scaffold_1039-fgenesh-gene-0.1
N
0.000
fgenesh_scip_prom.46568.5462
Phytophthora kernoviae
fgenesh_scip_prom.46568.5462
N
0.000
estExt_fgenesh1_kg.C_46590004
Phytophthora capsici
estExt_fgenesh1_kg.C_46590004
N
0.000