REL (Vicugna pacos)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSVPAG00000000493 T317581_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
REL
M02710_2.00
Homo sapiens
BGGRNWTTCC

GGAAWNYCCV
SELEX
Mathelier et al.(2014)
MA0101.1
0.953 0.953
REL
M09350_2.00
Homo sapiens
TGKVMTTYCCCHDBH

DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B
0.953 0.953
REL
M11235_2.00
Homo sapiens
BGGRNWTTCC

GGAAWNYCCV
Transfac
Matys et al.(2006)
V$CREL_01
0.953 0.953
REL
M11236_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREL_Q6
0.953 0.953
Rel
M09353_2.00
Mus musculus
TGKVMTTYCCCHDBH

DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A
0.929 0.929
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000000461 Rel 10 178

Links

Other Rel family TFs
Other Vicugna pacos TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R006375 Calypte anna Aan_R006375 I 0.793
Afo_R011359 Aptenodytes forsteri Afo_R011359 I 0.793
Brh_R000963 Buceros rhinoceros Brh_R000963 I 0.805
Cmyd_10008594 Chelonia mydas Cmyd_10008594 I 0.763
ENSAMEG00000018236 Ailuropoda melanoleuca ENSAMEG00000018236 I 0.976
ENSAMXG00000004647 Astyanax mexicanus ENSAMXG00000004647 I 0.722
ENSAPLG00000006795 Anas platyrhynchos ENSAPLG00000006795 I 0.763
ENSCSAG00000014415 Chlorocebus sabaeus ENSCSAG00000014415 I 0.722
ENSETEG00000002607 Echinops telfairi ENSETEG00000002607 I 0.941
ENSFALG00000011066 Ficedula albicollis ENSFALG00000011066 I 0.793
ENSGMOG00000018800 Gadus morhua ENSGMOG00000018800 I 0.704
ENSLACG00000008544 Latimeria chalumnae ENSLACG00000008544 I 0.769
ENSLOCG00000016127 Lepisosteus oculatus ENSLOCG00000016127 I 0.763
ENSMMUP00000014199 Macaca fascicularis ENSMMUP00000014199 I 0.959
ENSMPUG00000005180 Mustela putorius furo ENSMPUG00000005180 I 0.947
ENSNLEG00000009519 Nomascus leucogenys ENSNLEG00000009519 I 0.953
ENSOARG00000001457 Ovis aries ENSOARG00000001457 I 0.959
ENSONIG00000002983 Oreochromis niloticus ENSONIG00000002983 I 0.757
ENSP00000295025-D1 Bos grunniens ENSP00000295025-D1 I 0.953
ENSPANG00000006148 Papio anubis ENSPANG00000006148 I 0.959
ENSPFOG00000013038 Poecilia formosa ENSPFOG00000013038 I 0.728
ENSPPYG00000012391 Pongo abelii ENSPPYG00000012391 I 0.953
ENSPSIG00000013860 Pelodiscus sinensis ENSPSIG00000013860 I 0.775
ENSSHAG00000014405 Sarcophilus harrisii ENSSHAG00000014405 I 0.911
ENSSTOG00000005785 Ictidomys tridecemlineatus ENSSTOG00000005785 I 0.941
ENSTRUG00000006394 Takifugu rubripes ENSTRUG00000006394 I 0.740
ENSTSYG00000012918 Tarsius syrichta ENSTSYG00000012918 I 0.953
ENSXMAG00000007379 Xiphophorus maculatus ENSXMAG00000007379 I 0.728
Gfo_R008165 Geospiza fortis Gfo_R008165 I 0.787
Myotis_brandtii_REL_10034307 Myotis brandtii Myotis_brandtii_REL_10034307 I 0.870
Pvit_04537 Pogona vitticeps Pvit_04537 I 0.781
rel Xenopus tropicalis XB-GENE-993262 I 0.781
Rel Rattus norvegicus ENSRNOG00000054437 I 0.941
REL Taeniopygia guttata ENSTGUG00000006743 I 0.799
REL Sorex araneus ENSSARG00000011809 I 0.923
REL Cavia porcellus ENSCPOG00000011659 I 0.935
REL Sus scrofa ENSSSCG00000008388 I 0.876
REL Pteropus vampyrus ENSPVAG00000000364 I 0.905
REL Pan troglodytes ENSPTRG00000011949 I 0.953
REL Macaca mulatta ENSMMUG00000010834 I 0.959
REL Homo sapiens ENSG00000162924 D 0.953
REL Felis catus ENSFCAG00000008018 I 0.976
REL Equus caballus ENSECAG00000003277 I 0.947
rel Danio rerio ENSDARG00000055276 I 0.746
REL Callithrix jacchus ENSCJAG00000008975 I 0.953
REL Choloepus hoffmanni ENSCHOG00000010935 I 0.876
REL Canis familiaris ENSCAFG00000002981 I 0.976
REL Bos taurus ENSBTAG00000015386 I 0.953
REL Gallus gallus ENSGALG00000007845 I 0.799
REL Gorilla gorilla ENSGGOG00000024826 I 0.947
REL Loxodonta africana ENSLAFG00000013507 I 0.959
rel Oryzias latipes ENSORLG00000001586 I 0.704
REL Otolemur garnettii ENSOGAG00000013722 I 0.953
REL Oryctolagus cuniculus ENSOCUG00000004968 I 0.965
REL Ornithorhynchus anatinus ENSOANG00000012405 I 0.899
Rel Mus musculus ENSMUSG00000020275 D 0.929
REL Monodelphis domestica ENSMODG00000002172 I 0.911
REL Myotis lucifugus ENSMLUG00000007454 I 0.935
REL Meleagris gallopavo ENSMGAG00000001721 I 0.799
rel.L Xenopus laevis XB-GENE-993266 I 0.781
rel.S Xenopus laevis XB-GENE-17342653 I 0.775