CPIJ016826 (Culex quinquefasciatus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 CPIJ016826 T319319_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.779 0.779
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.779 0.779
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.779 0.779
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.779 0.779
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.779 0.779
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.779 0.779
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.779 0.779
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.779 0.779
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.779 0.779
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.779 0.779
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.779 0.779
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.779 0.779
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.768 0.768
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.768 0.768
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.768 0.768
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.768 0.768
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.768 0.768
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.768 0.768
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.768 0.768
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.768 0.768
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.768 0.768
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.768 0.768
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.768 0.768
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.768 0.768
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN

NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.747 0.747
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD

HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.747 0.747
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD

HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.747 0.747
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR

YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.747 0.747
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN

NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.747 0.747
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH

DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.747 0.747
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.747 0.747
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN

NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.747 0.747
RUNX2
M11255_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.747 0.747
RUNX2
M11256_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.747 0.747
RUNX2
M11257_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.747 0.747
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN

NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.747 0.747
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM

KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.737 0.737
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV

BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.737 0.737
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA

TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.737 0.737
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR

YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.737 0.737
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR

YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPIJ016826-PA Runt 93 187

Links

Other Runt family TFs
Other Culex quinquefasciatus TFs

273 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R012556 Calypte anna Aan_R012556 I 0.000
Afo_R002709 Aptenodytes forsteri Afo_R002709 I 0.000
Alligator_sinensis_CCG020164.1 Alligator sinensis Alligator_sinensis_CCG020164.1 I 0.000
Brh_R001506 Buceros rhinoceros Brh_R001506 I 0.000
Cmyd_10003742 Chelonia mydas Cmyd_10003742 I 0.000
ENSACAG00000012432 Anolis carolinensis ENSACAG00000012432 D 0.000
ENSAMEG00000000186 Ailuropoda melanoleuca ENSAMEG00000000186 I 0.000
ENSAMXG00000021599 Astyanax mexicanus ENSAMXG00000021599 I 0.000
ENSAPLG00000003032 Anas platyrhynchos ENSAPLG00000003032 I 0.000
ENSBTAG00000004029 Bos taurus ENSBTAG00000004029 I 0.000
ENSBTAP00000005261-D1 Bos grunniens ENSBTAP00000005261-D1 I 0.000
ENSCAFG00000008905 Canis familiaris ENSCAFG00000008905 I 0.000
ENSCHOG00000001981 Choloepus hoffmanni ENSCHOG00000001981 I 0.000
ENSCJAG00000016484 Callithrix jacchus ENSCJAG00000016484 I 0.000
ENSCPOG00000005739 Cavia porcellus ENSCPOG00000005739 I 0.000
ENSCSAG00000006043 Chlorocebus sabaeus ENSCSAG00000006043 I 0.000
lcor Danio rerio ENSDARG00000100908 I 0.000
ENSECAG00000013517 Equus caballus ENSECAG00000013517 I 0.000
ENSETEG00000015066 Echinops telfairi ENSETEG00000015066 I 0.000
ENSFALG00000008484 Ficedula albicollis ENSFALG00000008484 I 0.000
ENSFCAG00000028121 Felis catus ENSFCAG00000028121 I 0.000
LCOR Homo sapiens ENSG00000196233 I 0.000
ENSGACG00000007469 Gasterosteus aculeatus ENSGACG00000007469 D 0.000
ENSGALG00000023649 Gallus gallus ENSGALG00000023649 I 0.000
ENSGGOG00000026110 Gorilla gorilla ENSGGOG00000026110 I 0.000
ENSLACG00000001265 Latimeria chalumnae ENSLACG00000001265 I 0.000
ENSLAFG00000014271 Loxodonta africana ENSLAFG00000014271 I 0.000
ENSLOCG00000012823 Lepisosteus oculatus ENSLOCG00000012823 I 0.000
ENSMGAG00000009953 Meleagris gallopavo ENSMGAG00000009953 D 0.000
ENSMICG00000007572 Microcebus murinus ENSMICG00000007572 I 0.000
ENSMLUG00000000494 Myotis lucifugus ENSMLUG00000000494 I 0.000
ENSMMUG00000010425 Macaca mulatta ENSMMUG00000010425 I 0.000
ENSMODG00000004531 Monodelphis domestica ENSMODG00000004531 I 0.000
Lcor Mus musculus ENSMUSG00000025019 I 0.000
ENSNLEG00000013648 Nomascus leucogenys ENSNLEG00000013648 I 0.000
ENSOARG00000008725 Ovis aries ENSOARG00000008725 I 0.000
ENSOGAG00000008137 Otolemur garnettii ENSOGAG00000008137 I 0.000
ENSONIG00000000255 Oreochromis niloticus ENSONIG00000000255 I 0.000
ENSONIG00000018331 Oreochromis niloticus ENSONIG00000018331 I 0.000
ENSOPRG00000014745 Ochotona princeps ENSOPRG00000014745 I 0.000
ENSORLG00000000044 Oryzias latipes ENSORLG00000000044 D 0.000
ENSORLG00000007805 Oryzias latipes ENSORLG00000007805 D 0.000
ENSP00000360138 Macaca fascicularis ENSP00000360138 I 0.000
ENSPCAG00000007084 Procavia capensis ENSPCAG00000007084 I 0.000
ENSPFOG00000009902 Poecilia formosa ENSPFOG00000009902 I 0.000
ENSPFOG00000013017 Poecilia formosa ENSPFOG00000013017 I 0.000
ENSPSIG00000009179 Pelodiscus sinensis ENSPSIG00000009179 I 0.000
LCOR Pan troglodytes ENSPTRG00000002800 I 0.000
ENSPVAG00000003364 Pteropus vampyrus ENSPVAG00000003364 I 0.000
Lcor Rattus norvegicus ENSRNOG00000042679 I 0.000
ENSSARG00000008230 Sorex araneus ENSSARG00000008230 I 0.000
ENSSHAG00000018667 Sarcophilus harrisii ENSSHAG00000018667 I 0.000
ENSSSCG00000010511 Sus scrofa ENSSSCG00000010511 I 0.000
ENSSTOG00000010808 Ictidomys tridecemlineatus ENSSTOG00000010808 I 0.000
ENSTBEG00000005837 Tupaia belangeri ENSTBEG00000005837 I 0.000
ENSTGUG00000009834 Taeniopygia guttata ENSTGUG00000009834 I 0.000
lcor Tetraodon nigroviridis ENSTNIG00000003614 I 0.000
lcor Takifugu rubripes ENSTRUG00000006194 I 0.000
ENSTRUG00000008704 Takifugu rubripes ENSTRUG00000008704 I 0.000
ENSTTRG00000009856 Tursiops truncatus ENSTTRG00000009856 I 0.000
ENSVPAG00000007583 Vicugna pacos ENSVPAG00000007583 I 0.000
ENSXMAG00000002515 Xiphophorus maculatus ENSXMAG00000002515 I 0.000
ENSXMAG00000005637 Xiphophorus maculatus ENSXMAG00000005637 I 0.000
Gfo_R002325 Geospiza fortis Gfo_R002325 I 0.000
Myotis_brandtii_LCOR_10025723 Myotis brandtii Myotis_brandtii_LCOR_10025723 I 0.000
Ogr16502 Ophisaurus gracilis Ogr16502 I 0.000
Pvit_17823 Pogona vitticeps Pvit_17823 I 0.000
Tal_R010723 Tyto alba Tal_R010723 I 0.000
lcorl Xenopus tropicalis XB-GENE-995017 D 0.000