CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.H04654
(
Eucalyptus grandis
)
S1FA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04689 (S1FA)
IPR006779
Eucgr.H04654
T321497_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.H04654.1
S1FA
315
355
SDSRKGLSPGLIILISVADAAGVALLGLVVVYIYWKKKDTD
Eucgr.H04654.2
S1FA
315
355
SDSRKGLSPGLIILISVADAAGVALLGLVVVYIYWKKKDTD
Links
Other
S1FA
family TFs
Other
Eucalyptus grandis
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0010s06830
Populus trichocarpa
POPTR_0010s06830
N
0.829
evm.TU.supercontig_43.22
Carica papaya
evm.TU.supercontig_43.22
N
0.829
Thhalv10018190m.g
Eutrema salsugineum
Thhalv10018190m.g
N
0.825
chr1.LjT01D01.120.nd
Lotus japonicus
chr1.LjT01D01.120.nd
N
0.805
Ca_09421
Cicer arietinum
Ca_09421
N
0.805
PRUPE_ppa002123mg
Prunus persica
PRUPE_ppa002123mg
N
0.805
Pm006945
Prunus mume
Pm006945
N
0.805
Bo6g103870
Brassica oleracea
Bo6g103870
N
0.800
SapurV1A.2418s0010
Salix purpurea
SapurV1A.2418s0010
N
0.786
Bra004229
Brassica rapa
Bra004229
N
0.780
chr3.CM0116.60.nd
Lotus japonicus
chr3.CM0116.60.nd
N
0.780
Cagra.9801s0004
Capsella grandiflora
Cagra.9801s0004
N
0.780
Carubv10019872m.g
Capsella rubella
Carubv10019872m.g
N
0.780
MTR_7g070200
Medicago truncatula
MTR_7g070200
N
0.756
Ca_04428
Cicer arietinum
Ca_04428
N
0.756
SapurV1A.0021s0080
Salix purpurea
SapurV1A.0021s0080
N
0.756
MDP0000305994
Malus domestica
MDP0000305994
N
0.756
GLYMA07G19200
Glycine max
GLYMA07G19200
N
0.744
VIT_01s0010g02910
Vitis vinifera
VIT_01s0010g02910
N
0.732
GLYMA03G06320
Glycine max
GLYMA03G06320
N
0.732
TCM_010797
Theobroma cacao
TCM_010797
N
0.732
mgf019748m
Mimulus guttatus
mgf019748m
N
0.732
cassava14758.m1
Manihot esculenta
cassava14758.m1
N
0.707
GLYMA01G31480
Glycine max
GLYMA01G31480
N
0.707