CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Deaf1
(
Drosophila melanogaster
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
FBgn0013799
T321961_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables DNA-binding transcription factor activity and sequence-specific DNA binding activity. Involved in embryo development; regulation of immune response; and regulation of transcription, DNA-templated. Located in nucleus and polytene chromosome. Is expressed in several structures, including embryonic/larval midgut; embryonic/larval nervous system; extended germ band embryo; and presumptive embryonic/larval system. Human ortholog(s) of this gene implicated in Vulto-van Silfout-de Vries syndrome. Orthologous to human DEAF1 (DEAF1 transcription factor). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Deaf1
M06445_2.00
Drosophila melanogaster
VMCGAR
YTCGKB
B1H
Zhu et al.(2011)
Deaf1_FlyReg_FBgn0013799
(Direct)
(Direct)
Deaf1
M07544_2.00
Drosophila melanogaster
VMCGAR
YTCGKB
DNaseI footprinting
Mathelier et al.(2014)
MA0185.1
(Direct)
(Direct)
Deaf1
M11268_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$DEAF_01
(Direct)
(Direct)
Deaf1
M11269_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$DEAF1_Q6
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0074651
SAND
215
290
TQHNEVFQIRCKTTCAELYRSKLGSGGRGRCVKYKDKWHTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDEGTL
FBpp0100128
SAND
215
290
TQHNEVFQIRCKTTCAELYRSKLGSGGRGRCVKYKDKWHTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDEGTL
FBpp0302624
SAND
178
253
TQHNEVFQIRCKTTCAELYRSKLGSGGRGRCVKYKDKWHTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDEGTL
FBpp0304463
SAND
215
290
TQHNEVFQIRCKTTCAELYRSKLGSGGRGRCVKYKDKWHTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDEGTL
FBpp0304972
SAND
178
253
TQHNEVFQIRCKTTCAELYRSKLGSGGRGRCVKYKDKWHTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDEGTL
Links
Other
SAND
family TFs
Other
Drosophila melanogaster
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy