OBART04G20940 (Oryza barthii)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OBART04G20940 T322775_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL4
M02472_2.00
Arabidopsis thaliana
NRTACDDNN

NNHHGTAYN
PBM
Weirauch et al.(2014)
pTH7408
0.941 0.707
SPL14
M02470_2.00
Arabidopsis thaliana
NNNRTACNN

NNGTAYNNN
PBM
Weirauch et al.(2014)
pTH8191
0.937 0.653
SPL14
M07253_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL14_col_a
0.937 0.653
SPL14
M11270_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPL14_01
0.937 0.653
POPTR_0002s00440
M02477_2.00
Populus trichocarpa
NGTACGG

CCGTACN
PBM
Weirauch et al.(2014)
pTH9280
0.935 0.640
SPL12
M02475_2.00
Arabidopsis thaliana
NGTACGDN

NHCGTACN
PBM
Weirauch et al.(2014)
pTH7500
0.935 0.680
estExt_fgenesh1_pg.C_1940033
M02479_2.00
Physcomitrella patens
NNGTACGDH

DHCGTACNN
PBM
Weirauch et al.(2014)
pTH8664
0.930 0.720
PK22320.1
M02483_2.00
Cannabis sativa
NNGTACGGNN

NNCCGTACNN
PBM
Weirauch et al.(2014)
pTH9723
0.929 0.693
AT1G76580
M02473_2.00
Arabidopsis thaliana
NNNRTAYNNN

NNNRTAYNNN
PBM
Weirauch et al.(2014)
pTH8668
0.929 0.640
SPL5
M02474_2.00
Arabidopsis thaliana
NNGTACGDN

NHCGTACNN
PBM
Weirauch et al.(2014)
pTH7385
0.927 0.680
SPL5
M07261_2.00
Arabidopsis thaliana
NDNYGTACGGAH

DTCCGTACRNHN
Dap-seq
OMalley et al.(2016)
SPL5_col_a
0.927 0.680
SPL5
M07262_2.00
Arabidopsis thaliana
NBGTACGGWH

DWCCGTACVN
Dap-seq
OMalley et al.(2016)
SPL5_colamp_a
0.927 0.680
PRUPE_ppa000682mg
M02478_2.00
Prunus persica
NNNNGTACGD

HCGTACNNNN
PBM
Weirauch et al.(2014)
pTH9281
0.922 0.640
PK06791.1
M02482_2.00
Cannabis sativa
NNGTACGRN

NYCGTACNN
PBM
Weirauch et al.(2014)
pTH9583
0.920 0.653
SPL1
M00887_2.00
Arabidopsis thaliana
NGTACGGHN

NDCCGTACN
PBM
Franco-Zorrilla et al.(2014)
SPL1
0.920 0.680
SPL1
M07259_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL1_col_a
0.920 0.680
SPL1
M07260_2.00
Arabidopsis thaliana
NNGTACGKWH

DWMCGTACNN
Dap-seq
OMalley et al.(2016)
SPL1_colamp_a
0.920 0.680
SPL3
M07255_2.00
Arabidopsis thaliana
NGTACGGA

TCCGTACN
Dap-seq
OMalley et al.(2016)
SPL3_col_a
0.895 0.693
SPL3
M07256_2.00
Arabidopsis thaliana
NDNTGTACGGAHN

NDTCCGTACANHN
Dap-seq
OMalley et al.(2016)
SPL3_colamp_a
0.895 0.693
SPL3
M02715_2.00
Arabidopsis thaliana
DDDDDNGTACGKHHHH

DDDDMCGTACNHHHHH
SELEX
Mathelier et al.(2014)
MA0577.1
0.895 0.693
SPL13A
M07265_2.00
Arabidopsis thaliana
DNYGTACGGWH

DWCCGTACRNH
Dap-seq
OMalley et al.(2016)
SPL13_col_a
0.889 0.613
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART04G20940.1 SBP 108 182

Links

Other SBP family TFs
Other Oryza barthii TFs

521 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R009776 Calypte anna Aan_R009776 I 0.000
Aan_R014924 Calypte anna Aan_R014924 I 0.000
Afo_R010364 Aptenodytes forsteri Afo_R010364 I 0.000
Afo_R014904 Aptenodytes forsteri Afo_R014904 I 0.000
Alligator_sinensis_CCG001232.1 Alligator sinensis Alligator_sinensis_CCG001232.1 I 0.000
Alligator_sinensis_CCG012608.1 Alligator sinensis Alligator_sinensis_CCG012608.1 I 0.000
Brh_R005747 Buceros rhinoceros Brh_R005747 I 0.000
Brh_R006445 Buceros rhinoceros Brh_R006445 I 0.000
Cmyd_10002843 Chelonia mydas Cmyd_10002843 I 0.000
Cmyd_10011933 Chelonia mydas Cmyd_10011933 I 0.000
MYB Anolis carolinensis ENSACAG00000009861 I 0.000
MYBL1 Anolis carolinensis ENSACAG00000016577 I 0.000
ENSAMEG00000009813 Ailuropoda melanoleuca ENSAMEG00000009813 I 0.000
ENSAMEG00000012401 Ailuropoda melanoleuca ENSAMEG00000012401 I 0.000
ENSAMXG00000004244 Astyanax mexicanus ENSAMXG00000004244 I 0.000
ENSAMXG00000013759 Astyanax mexicanus ENSAMXG00000013759 I 0.000
ENSAPLG00000007728 Anas platyrhynchos ENSAPLG00000007728 I 0.000
ENSAPLG00000014596 Anas platyrhynchos ENSAPLG00000014596 I 0.000
MYBL1 Bos taurus ENSBTAG00000011981 I 0.000
MYB Bos taurus ENSBTAG00000012074 I 0.000
MYB Canis familiaris ENSCAFG00000000230 I 0.000
MYBL1 Canis familiaris ENSCAFG00000007344 I 0.000
MYB Choloepus hoffmanni ENSCHOG00000010472 I 0.000
MYBL1 Choloepus hoffmanni ENSCHOG00000012311 I 0.000
MYBL1 Callithrix jacchus ENSCJAG00000004466 I 0.000
MYB Callithrix jacchus ENSCJAG00000007798 I 0.000
MYBL1 Cavia porcellus ENSCPOG00000007578 I 0.000
MYB Cavia porcellus ENSCPOG00000014607 I 0.000
ENSCSAG00000014195 Chlorocebus sabaeus ENSCSAG00000014195 I 0.000
ENSCSAG00000016815 Chlorocebus sabaeus ENSCSAG00000016815 I 0.000
mybl1 Danio rerio ENSDARG00000030999 I 0.000
myb Danio rerio ENSDARG00000053666 I 0.000
MYBL1 Dasypus novemcinctus ENSDNOG00000016860 I 0.000
MYB Dasypus novemcinctus ENSDNOG00000047370 I 0.000
MYB Equus caballus ENSECAG00000009918 I 0.000
MYBL1 Equus caballus ENSECAG00000015959 I 0.000
MYB Erinaceus europaeus ENSEEUG00000001468 I 0.000
MYBL1 Echinops telfairi ENSETEG00000009840 I 0.000
ENSFALG00000005444 Ficedula albicollis ENSFALG00000005444 I 0.000
ENSFALG00000011914 Ficedula albicollis ENSFALG00000011914 I 0.000
MYB Felis catus ENSFCAG00000001812 I 0.000
MYBL1 Felis catus ENSFCAG00000031398 I 0.000
MYB Homo sapiens ENSG00000118513 D 0.000
MYBL1 Homo sapiens ENSG00000185697 D 0.000
mybl1 Gasterosteus aculeatus ENSGACG00000002964 I 0.000
myb Gasterosteus aculeatus ENSGACG00000011054 I 0.000
MYB Gallus gallus ENSGALG00000013956 I 0.000
ENSGALG00000015522 Gallus gallus ENSGALG00000015522 I 0.000
MYB Gorilla gorilla ENSGGOG00000001379 I 0.000
MYBL1 Gorilla gorilla ENSGGOG00000003892 I 0.000
ENSGMOG00000011856 Gadus morhua ENSGMOG00000011856 I 0.000
ENSGMOG00000017106 Gadus morhua ENSGMOG00000017106 I 0.000
ENSLACG00000002813 Latimeria chalumnae ENSLACG00000002813 I 0.000
ENSLACG00000011097 Latimeria chalumnae ENSLACG00000011097 I 0.000
MYBL1 Loxodonta africana ENSLAFG00000004821 I 0.000
MYB Loxodonta africana ENSLAFG00000018350 I 0.000
ENSLOCG00000004709 Lepisosteus oculatus ENSLOCG00000004709 I 0.000
ENSLOCG00000016218 Lepisosteus oculatus ENSLOCG00000016218 I 0.000
ENSMEUG00000010838 Macropus eugenii ENSMEUG00000010838 I 0.000
MYB Meleagris gallopavo ENSMGAG00000013053 I 0.000
MYB Microcebus murinus ENSMICG00000005531 I 0.000
MYBL1 Microcebus murinus ENSMICG00000009881 I 0.000
MYB Myotis lucifugus ENSMLUG00000002125 I 0.000
MYBL1 Myotis lucifugus ENSMLUG00000003166 I 0.000
MYBL1 Macaca mulatta ENSMMUG00000013974 I 0.000
MYB Macaca mulatta ENSMMUG00000018166 I 0.000
MYBL1 Monodelphis domestica ENSMODG00000007964 I 0.000
MYB Monodelphis domestica ENSMODG00000017488 I 0.000
ENSMPUG00000014814 Mustela putorius furo ENSMPUG00000014814 I 0.000
Myb Mus musculus ENSMUSG00000019982 D 0.000
Mybl1 Mus musculus ENSMUSG00000025912 D 0.000
ENSNLEG00000014751 Nomascus leucogenys ENSNLEG00000014751 I 0.000
MYBL1 Ornithorhynchus anatinus ENSOANG00000002308 I 0.000
MYB Ornithorhynchus anatinus ENSOANG00000002777 I 0.000
ENSOARG00000014901 Ovis aries ENSOARG00000014901 I 0.000
ENSOARG00000017663 Ovis aries ENSOARG00000017663 I 0.000
MYB Oryctolagus cuniculus ENSOCUG00000011633 I 0.000
MYBL1 Oryctolagus cuniculus ENSOCUG00000015184 I 0.000
MYB Otolemur garnettii ENSOGAG00000000056 I 0.000
MYBL1 Otolemur garnettii ENSOGAG00000004344 I 0.000
ENSONIG00000000469 Oreochromis niloticus ENSONIG00000000469 I 0.000
ENSONIG00000014188 Oreochromis niloticus ENSONIG00000014188 I 0.000
MYBL1 Ochotona princeps ENSOPRG00000005971 I 0.000
MYB Ochotona princeps ENSOPRG00000013639 I 0.000
mybl1 Oryzias latipes ENSORLG00000008488 I 0.000
myb Oryzias latipes ENSORLG00000016573 I 0.000
ENSP00000339992 Macaca fascicularis ENSP00000339992 I 0.000
ENSP00000339992-D1 Bos grunniens ENSP00000339992-D1 I 0.000
ENSP00000385360 Macaca fascicularis ENSP00000385360 I 0.000
ENSPANG00000008051 Papio anubis ENSPANG00000008051 I 0.000
ENSPANG00000018932 Papio anubis ENSPANG00000018932 I 0.000
MYB Procavia capensis ENSPCAG00000009197 I 0.000
MYBL1 Procavia capensis ENSPCAG00000009301 I 0.000
ENSPFOG00000005169 Poecilia formosa ENSPFOG00000005169 I 0.000
ENSPFOG00000011241 Poecilia formosa ENSPFOG00000011241 I 0.000
ENSPMAG00000000117 Petromyzon marinus ENSPMAG00000000117 I 0.000
ENSPMAG00000001639 Petromyzon marinus ENSPMAG00000001639 I 0.000
ENSPPYG00000017028 Pongo abelii ENSPPYG00000017028 I 0.000
ENSPPYG00000018640 Pongo abelii ENSPPYG00000018640 I 0.000
ENSPSIG00000011892 Pelodiscus sinensis ENSPSIG00000011892 I 0.000
ENSPSIG00000011935 Pelodiscus sinensis ENSPSIG00000011935 I 0.000
MYB Pan troglodytes ENSPTRG00000018631 I 0.000
MYBL1 Pan troglodytes ENSPTRG00000020308 I 0.000
MYB Pteropus vampyrus ENSPVAG00000007652 I 0.000
Mybl1 Rattus norvegicus ENSRNOG00000021669 I 0.000
Myb Rattus norvegicus ENSRNOG00000055858 I 0.000
MYB Sorex araneus ENSSARG00000002855 I 0.000
MYBL1 Sorex araneus ENSSARG00000006938 I 0.000
ENSSHAG00000010559 Sarcophilus harrisii ENSSHAG00000010559 I 0.000
ENSSHAG00000014728 Sarcophilus harrisii ENSSHAG00000014728 I 0.000
MYB Sus scrofa ENSSSCG00000004167 I 0.000
ENSSTOG00000006634 Ictidomys tridecemlineatus ENSSTOG00000006634 I 0.000
ENSSTOG00000007581 Ictidomys tridecemlineatus ENSSTOG00000007581 I 0.000
MYB Tupaia belangeri ENSTBEG00000016454 I 0.000
MYBL1 Taeniopygia guttata ENSTGUG00000011289 I 0.000
MYB Taeniopygia guttata ENSTGUG00000011495 I 0.000
mybl1 Tetraodon nigroviridis ENSTNIG00000010104 I 0.000
myb Tetraodon nigroviridis ENSTNIG00000016319 I 0.000
mybl1 Takifugu rubripes ENSTRUG00000008816 I 0.000
myb Takifugu rubripes ENSTRUG00000016069 I 0.000
ENSTSYG00000014301 Tarsius syrichta ENSTSYG00000014301 I 0.000
MYB Tursiops truncatus ENSTTRG00000003718 I 0.000
MYBL1 Tursiops truncatus ENSTTRG00000017138 I 0.000
MYBL1 Vicugna pacos ENSVPAG00000004194 I 0.000
ENSXMAG00000001658 Xiphophorus maculatus ENSXMAG00000001658 I 0.000
ENSXMAG00000004392 Xiphophorus maculatus ENSXMAG00000004392 I 0.000
estExt_fgenesh2_pg.C_1220082 Branchiostoma floridae estExt_fgenesh2_pg.C_1220082 I 0.000
estExt_fgenesh2_pg.C_1220090 Branchiostoma floridae estExt_fgenesh2_pg.C_1220090 I 0.000
Gfo_R002003 Geospiza fortis Gfo_R002003 I 0.000
Gfo_R006432 Geospiza fortis Gfo_R006432 I 0.000
MYB_AVIMB Avian myeloblastosis virus MYB_AVIMB D 0.000
Myotis_brandtii_MYBL1_10031628 Myotis brandtii Myotis_brandtii_MYBL1_10031628 I 0.000
Myotis_brandtii_MYB_10035701 Myotis brandtii Myotis_brandtii_MYB_10035701 I 0.000
Ogr00471 Ophisaurus gracilis Ogr00471 I 0.000
Ogr08782 Ophisaurus gracilis Ogr08782 I 0.000
Pvit_15001 Pogona vitticeps Pvit_15001 I 0.000
Pvit_17294 Pogona vitticeps Pvit_17294 I 0.000
Sakowv30034766m.g Saccoglossus kowalevskii Sakowv30034766m.g I 0.000
SMAR001262 Strigamia maritima SMAR001262 I 0.000
Tal_R003498 Tyto alba Tal_R003498 I 0.000
Tal_R007653 Tyto alba Tal_R007653 I 0.000
myb Xenopus tropicalis XB-GENE-867553 I 0.000
myb.S Xenopus laevis XB-GENE-867566 I 0.000
mybl1 Xenopus tropicalis XB-GENE-986560 I 0.000
mybl1.L Xenopus laevis XB-GENE-986561 I 0.000
XP_002935855 Xenopus tropicalis XP_002935855 I 0.000