POPTR_0003s17120 (Populus trichocarpa)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 POPTR_0003s17120 T322950_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL10
M01084_2.00
Arabidopsis thaliana
NNGTACGRHN

NDYCGTACNN
PBM
Sullivan et al.(2014)
pTH9749
0.912 0.827
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s17120.1 SBP 187 261

Links

Other SBP family TFs
Other Populus trichocarpa TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R012447 Calypte anna Aan_R012447 I 0.000
Alligator_sinensis_CCG014487.1 Alligator sinensis Alligator_sinensis_CCG014487.1 I 0.000
Brh_R005067 Buceros rhinoceros Brh_R005067 I 0.000
Cmyd_10015801 Chelonia mydas Cmyd_10015801 I 0.000
ZNF652 Anolis carolinensis ENSACAG00000006063 I 0.000
ENSAMEG00000012387 Ailuropoda melanoleuca ENSAMEG00000012387 I 0.000
ENSAMXG00000000691 Astyanax mexicanus ENSAMXG00000000691 I 0.000
ENSAPLG00000012036 Anas platyrhynchos ENSAPLG00000012036 I 0.000
ZNF652 Bos taurus ENSBTAG00000001919 I 0.000
ENSBTAP00000002495-D1 Bos grunniens ENSBTAP00000002495-D1 I 0.000
ZNF652 Canis familiaris ENSCAFG00000016924 I 0.000
ZNF652 Callithrix jacchus ENSCJAG00000007206 I 0.000
ENSCPOG00000012856 Cavia porcellus ENSCPOG00000012856 I 0.000
ENSCSAG00000002462 Chlorocebus sabaeus ENSCSAG00000002462 I 0.000
znf652 Danio rerio ENSDARG00000062302 I 0.000
ZNF652 Dasypus novemcinctus ENSDNOG00000016747 I 0.000
ZNF652 Equus caballus ENSECAG00000016968 I 0.000
ZNF652 Felis catus ENSFCAG00000000115 I 0.000
ZNF652 Homo sapiens ENSG00000198740 I 0.000
zbtb47b Gasterosteus aculeatus ENSGACG00000003372 I 0.000
znf652 Gasterosteus aculeatus ENSGACG00000009154 I 0.000
ZNF652 Gallus gallus ENSGALG00000001279 I 0.000
ZNF652 Gorilla gorilla ENSGGOG00000010288 I 0.000
ENSGMOG00000014245 Gadus morhua ENSGMOG00000014245 I 0.000
ZNF652 Loxodonta africana ENSLAFG00000010084 I 0.000
ENSLOCG00000011452 Lepisosteus oculatus ENSLOCG00000011452 I 0.000
ZNF652 Meleagris gallopavo ENSMGAG00000002434 I 0.000
ZNF652 Myotis lucifugus ENSMLUG00000012963 I 0.000
ZNF652 Macaca mulatta ENSMMUG00000003453 I 0.000
ZNF652 Monodelphis domestica ENSMODG00000012215 I 0.000
ENSMPUG00000015376 Mustela putorius furo ENSMPUG00000015376 I 0.000
Zfp652 Mus musculus ENSMUSG00000075595 D 0.000
ENSOARG00000006129 Ovis aries ENSOARG00000006129 I 0.000
ZNF652 Oryctolagus cuniculus ENSOCUG00000002965 I 0.000
ENSONIG00000000921 Oreochromis niloticus ENSONIG00000000921 I 0.000
znf652 Oryzias latipes ENSORLG00000003126 I 0.000
ENSP00000416305 Macaca fascicularis ENSP00000416305 I 0.000
ENSPANG00000022829 Papio anubis ENSPANG00000022829 I 0.000
ENSPFOG00000008742 Poecilia formosa ENSPFOG00000008742 I 0.000
ZNF652 Pan troglodytes ENSPTRG00000009374 I 0.000
ZNF652 Pteropus vampyrus ENSPVAG00000004287 I 0.000
Zfp652 Rattus norvegicus ENSRNOG00000017001 I 0.000
ENSSHAG00000002263 Sarcophilus harrisii ENSSHAG00000002263 I 0.000
ZNF652 Sus scrofa ENSSSCG00000017546 I 0.000
ENSSTOG00000011303 Ictidomys tridecemlineatus ENSSTOG00000011303 I 0.000
ZNF652 Tupaia belangeri ENSTBEG00000010480 I 0.000
znf652 Takifugu rubripes ENSTRUG00000016405 I 0.000
ZNF652 Tursiops truncatus ENSTTRG00000004704 I 0.000
ZNF652 Vicugna pacos ENSVPAG00000001680 I 0.000
Myotis_brandtii_ZNF652_10017040 Myotis brandtii Myotis_brandtii_ZNF652_10017040 I 0.000
Tal_R007309 Tyto alba Tal_R007309 I 0.000
znf652 Xenopus tropicalis XB-GENE-1020912 I 0.000
znf652.S Xenopus laevis XB-GENE-1020916 I 0.000
znf652.L Xenopus laevis XB-GENE-6465969 I 0.000