29726.m003959 (Ricinus communis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 29726.m003959 T323217_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL7
M02476_2.00
Arabidopsis thaliana
DGTACKDNN

NNHMGTACH
PBM
Weirauch et al.(2014)
pTH7288
0.974 0.880
SPL7
M00888_2.00
Arabidopsis thaliana
GGRGDAAAGG

CCTTTHCYCC
PBM
Franco-Zorrilla et al.(2014)
SPL7
0.974 0.880
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29726.m003959 SBP 147 221

Links

Other SBP family TFs
Other Ricinus communis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000001827 Ailuropoda melanoleuca ENSAMEG00000001827 N 0.000
ENSAMEG00000012533 Ailuropoda melanoleuca ENSAMEG00000012533 N 0.000
Alligator_sinensis_CCG001228.1 Alligator sinensis Alligator_sinensis_CCG001228.1 N 0.000
TCF24 Anolis carolinensis ENSACAG00000016461 N 0.000
ENSAMXG00000013680 Astyanax mexicanus ENSAMXG00000013680 N 0.000
ENSP00000296096-D1 Bos grunniens ENSP00000296096-D1 N 0.000
TCF23 Bos taurus ENSBTAG00000014813 N 0.000
TCF23 Callithrix jacchus ENSCJAG00000001198 N 0.000
TCF23 Canis familiaris ENSCAFG00000030192 N 0.000
TCF24 Canis familiaris ENSCAFG00000029615 N 0.000
TCF24 Cavia porcellus ENSCPOG00000014534 N 0.000
ENSCPOG00000003785 Cavia porcellus ENSCPOG00000003785 N 0.000
Cmyd_10002847 Chelonia mydas Cmyd_10002847 N 0.000
ENSCSAG00000014111 Chlorocebus sabaeus ENSCSAG00000014111 N 0.000
ENSCSAG00000009631 Chlorocebus sabaeus ENSCSAG00000009631 N 0.000
TCF23 Choloepus hoffmanni ENSCHOG00000004803 N 0.000
CGI_10026943 Crassostrea gigas CGI_10026943 N 0.000
TCF24 Danio rerio ENSDARG00000086944 N 0.000
ENSDNOG00000030981 Dasypus novemcinctus ENSDNOG00000030981 N 0.000
TCF24 Dasypus novemcinctus ENSDNOG00000045736 N 0.000
Tcf23 Dipodomys ordii ENSDORG00000014403 N 0.000
TCF23 Equus caballus ENSECAG00000021374 N 0.000
TCF23 Erinaceus europaeus ENSEEUG00000007250 N 0.000
TCF23 Felis catus ENSFCAG00000022795 N 0.000
ENSGACG00000002911 Gasterosteus aculeatus ENSGACG00000002911 N 0.000
Gfo_R001999 Geospiza fortis Gfo_R001999 N 0.000
TCF23 Gorilla gorilla ENSGGOG00000002612 N 0.000
TCF24 Gorilla gorilla ENSGGOG00000027653 N 0.000
TCF23 Homo sapiens ENSG00000163792 N 0.000
TCF24 Homo sapiens ENSG00000261787 N 0.000
ENSSTOG00000007256 Ictidomys tridecemlineatus ENSSTOG00000007256 N 0.000
ENSSTOG00000015523 Ictidomys tridecemlineatus ENSSTOG00000015523 N 0.000
ENSLACG00000014458 Latimeria chalumnae ENSLACG00000014458 N 0.000
ENSLACG00000004204 Latimeria chalumnae ENSLACG00000004204 N 0.000
ENSLOCG00000004611 Lepisosteus oculatus ENSLOCG00000004611 N 0.000
ENSLOCG00000015901 Lepisosteus oculatus ENSLOCG00000015901 N 0.000
TCF23 Loxodonta africana ENSLAFG00000014587 N 0.000
ENSP00000296096 Macaca fascicularis ENSP00000296096 N 0.000
TCF23 Macaca mulatta ENSMMUG00000015867 N 0.000
TCF23 Microcebus murinus ENSMICG00000017064 N 0.000
ENSMODG00000024958 Monodelphis domestica ENSMODG00000024958 N 0.000
TCF23 Monodelphis domestica ENSMODG00000015714 N 0.000
Tcf24 Mus musculus ENSMUSG00000099032 N 0.000
Tcf23 Mus musculus ENSMUSG00000006642 N 0.000
ENSNLEG00000003009 Nomascus leucogenys ENSNLEG00000003009 N 0.000
ENSNLEG00000010898 Nomascus leucogenys ENSNLEG00000010898 N 0.000
ENSOPRG00000010556 Ochotona princeps ENSOPRG00000010556 N 0.000
Ogr10845 Ophisaurus gracilis Ogr10845 N 0.000
TCF24 Ornithorhynchus anatinus ENSOANG00000002317 N 0.000
TCF23 Ornithorhynchus anatinus ENSOANG00000003936 N 0.000
ENSOCUG00000008655 Oryctolagus cuniculus ENSOCUG00000008655 N 0.000
TCF23 Otolemur garnettii ENSOGAG00000006528 N 0.000
ENSOARG00000000076 Ovis aries ENSOARG00000000076 N 0.000
ENSOARG00000019168 Ovis aries ENSOARG00000019168 N 0.000
TCF23 Pan troglodytes ENSPTRG00000011753 N 0.000
ENSPANG00000009856 Papio anubis ENSPANG00000009856 N 0.000
ENSPANG00000017721 Papio anubis ENSPANG00000017721 N 0.000
ENSPSIG00000014305 Pelodiscus sinensis ENSPSIG00000014305 N 0.000
ENSPFOG00000004192 Poecilia formosa ENSPFOG00000004192 N 0.000
Pvit_15007 Pogona vitticeps Pvit_15007 N 0.000
ENSPPYG00000012560 Pongo abelii ENSPPYG00000012560 N 0.000
ENSPVAG00000015152 Pteropus vampyrus ENSPVAG00000015152 N 0.000
Tcf23 Rattus norvegicus ENSRNOG00000025736 N 0.000
Tcf24 Rattus norvegicus ENSRNOG00000052668 N 0.000
Sakowv30044060m.g Saccoglossus kowalevskii Sakowv30044060m.g N 0.000
ENSSHAG00000012462 Sarcophilus harrisii ENSSHAG00000012462 N 0.000
TCF23 Sus scrofa ENSSSCG00000027409 N 0.000
TCF24 Takifugu rubripes ENSTRUG00000009376 N 0.000
TCF23 Tupaia belangeri ENSTBEG00000006967 N 0.000
TCF23 Tursiops truncatus ENSTTRG00000005255 N 0.000
TCF24 Tursiops truncatus ENSTTRG00000017150 N 0.000