MLOC_4725 (Hordeum vulgare)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 MLOC_4725 T323873_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_4725.10 Sigma 70 277 347
MLOC_4725.1 Sigma 70 159 229
MLOC_4725.2 Sigma 70 159 229
MLOC_4725.3 Sigma 70 277 347
MLOC_4725.4 Sigma 70 315 385
MLOC_4725.5 Sigma 70 312 382
MLOC_4725.6 Sigma 70 312 382
MLOC_4725.7 Sigma 70 277 347
MLOC_4725.8 Sigma 70 277 347
MLOC_4725.9 Sigma 70 315 385

Links

Other Sigma 70 family TFs
Other Hordeum vulgare TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA028267 Oryza indica BGIOSGA028267 N 0.930
BRADI1G00750 Brachypodium distachyon BRADI1G00750 N 1.000
F775_07378 Aegilops tauschii F775_07378 N 1.000
GRMZM2G144196 Zea mays GRMZM2G144196 N 0.930
LPERR08G06520 Leersia perrieri LPERR08G06520 N 0.915
OB08G17050 Oryza brachyantha OB08G17050 N 0.944
OBART08G07320 Oryza barthii OBART08G07320 N 0.930
OGLUM08G08160 Oryza glumaepatula OGLUM08G08160 N 0.930
OLONG_007958 Oryza longistaminata OLONG_007958 N 0.930
OMERI03G18460 Oryza meridionalis OMERI03G18460 N 0.930
ONIVA08G08070 Oryza nivara ONIVA08G08070 N 0.930
OPUNC08G07030 Oryza punctata OPUNC08G07030 N 0.944
ORGLA08G0064000 Oryza glaberrima ORGLA08G0064000 N 0.930
ORUFI08G08440 Oryza rufipogon ORUFI08G08440 N 0.930
OS08G0242800 Oryza sativa OS08G0242800 N 0.930
Pavir.Ha01929 Panicum virgatum Pavir.Ha01929 N 0.930
Pavir.Ia00050 Panicum virgatum Pavir.Ia00050 N 0.915
Pavir.Ib04452 Panicum virgatum Pavir.Ib04452 N 0.944
Sb01g000390 Sorghum bicolor Sb01g000390 N 0.930
Si034994m.g Setaria italica Si034994m.g N 0.944
Traes_4AL_A0565AC4C Triticum aestivum Traes_4AL_A0565AC4C N 1.000
Traes_5BL_B1F704307 Triticum aestivum Traes_5BL_B1F704307 N 1.000
Traes_5DL_8DC4CC983 Triticum aestivum Traes_5DL_8DC4CC983 N 1.000
TRIUR3_06257 Triticum urartu TRIUR3_06257 N 1.000