PPA18485 (Pristionchus pacificus)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 PPA18485 T325180_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NfI
M03968_2.00 		Drosophila melanogaster
YTGGCDNNNHGCCAR
YTGGCDNNNHGCCAR		 SELEX
Nitta et al.(2015)
NfI_1 		0.758 0.758
NFIC
M05745_2.00 		Homo sapiens
NTTGGCNNNNTGCCARN
NYTGGCANNNNGCCAAN		 SELEX
Yin et al.(2017)
NFIC_FL_HT-SELEX 		0.725 0.725
NFIC
M08164_2.00 		Homo sapiens
NNCTTGGCANN
NNTGCCAAGNN		 ChIP-seq
Mathelier et al.(2014)
MA0161.2 		0.725 0.725
NFIC
M09378_2.00 		Homo sapiens
BYTGGMHBYNDKCCMRV
BYKGGMHNRVDKCCARV		 Misc
Kulakovskiy et al.(2013)
NFIC_HUMAN.H11MO.0.A 		0.725 0.725
Nfic
M09385_2.00 		Mus musculus
NBYTGGCWN
NWGCCARVN		 Misc
Kulakovskiy et al.(2013)
NFIC_MOUSE.H11MO.0.A 		0.725 0.725
NFIC
M09635_2.00 		Homo sapiens
BYTGSCAV
BTGSCARV		 Misc
Heinz et al.(2010)
LNCaP-NF1_Unpublished 		0.725 0.725
NFIC
M09636_2.00 		Homo sapiens
BYTGGCHNNNDGCCAR
YTGGCHNNNDGCCARV		 Misc
Heinz et al.(2010)
LNCAP-NF1_Unpublished 		0.725 0.725
NFIC
M11278_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CTF1_01 		0.725 0.725
NFIC
M11279_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1C_Q6 		0.725 0.725
NFIC
M05746_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIC_FL_Methyl-HT-SELEX 		0.725 0.725
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA18485 SMAD 77 181

Links

Other SMAD family TFs
Other Pristionchus pacificus TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold324-EXSNAP2012.31 Pristionchus exspectatus scaffold324-EXSNAP2012.31 I 1.000
SVUK_0000435801 Strongylus vulgaris SVUK_0000435801 I 0.894
CGOC_0000769801 Cylicostephanus goldi CGOC_0000769801 I 0.894
ASU_05356 Ascaris suum ASU_05356 I 0.802
EVEC_0001120201 Enterobius vermicularis EVEC_0001120201 I 0.802
TCNE_0001032701 Toxocara canis TCNE_0001032701 I 0.802
ASIM_0001221201 Anisakis simplex ASIM_0001221201 I 0.802
ACOC_0000978701 Angiostrongylus costaricensis ACOC_0000978701 I 0.791
ACAC_0000812601 Angiostrongylus cantonensis ACAC_0000812601 I 0.791
DICVIV_06041 Dictyocaulus viviparus DICVIV_06041 I 0.791
ANCCAN_03078 Ancylostoma caninum ANCCAN_03078 I 0.791
ANCDUO_02770 Ancylostoma duodenale ANCDUO_02770 I 0.791
HPBE_0002427601 Heligmosomoides bakeri HPBE_0002427601 I 0.791
nOo.2.0.1.g12948 Onchocerca ochengi nOo.2.0.1.g12948 I 0.791
OFLC_0001047301 Onchocerca flexuosa OFLC_0001047301 I 0.791
SMUV_0000807101 Syphacia muris SMUV_0000807101 I 0.791
nLs.2.1.2.g06746 Litomosoides sigmodontis nLs.2.1.2.g06746 I 0.791
nDi.2.2.2.g05388 Dirofilaria immitis nDi.2.2.2.g05388 I 0.791
LOAG_08303 Loa loa LOAG_08303 I 0.791
nAv.1.0.1.g02718 Acanthocheilonema viteae nAv.1.0.1.g02718 I 0.791
EEL_0000990501 Elaeophora elaphi EEL_0000990501 I 0.791
WBGene00247194 Onchocerca volvulus WBGene00247194 I 0.791
WUBG_02198 Wuchereria bancrofti WUBG_02198 I 0.791
Bm7659 Brugia malayi Bm7659 I 0.791
HCOI01452900 Haemonchus contortus HCOI01452900 I 0.780
L898_g32383 Steinernema monticolum L898_g32383 I 0.780
L889_g1991 Steinernema feltiae L889_g1991 I 0.780
MhA1_Contig410.frz3.gene15 Meloidogyne hapla MhA1_Contig410.frz3.gene15 I 0.780
DME_0000465201 Dracunculus medinensis DME_0000465201 I 0.769
BXY_1713100 Bursaphelenchus xylophilus BXY_1713100 I 0.769
L893_g18810 Steinernema glaseri L893_g18810 I 0.769
GM26787 Drosophila sechellia FBgn0181640 I 0.758
GD24387 Drosophila simulans FBgn0195728 I 0.758
GF21690 Drosophila ananassae FBgn0098690 I 0.758
GL18152 Drosophila persimilis FBgn0155755 I 0.758
GH23980 Drosophila grimshawi FBgn0131437 I 0.758
GG16454 Drosophila erecta FBgn0108685 I 0.758
GI14107 Drosophila mojavensis FBgn0136861 I 0.758
GJ21334 Drosophila virilis FBgn0208464 I 0.758
LCUP004691 Lucilia cuprina LCUP004691 I 0.758
MDOA004700 Musca domestica MDOA004700 I 0.758
L596_g9152 Steinernema carpocapsae L596_g9152 I 0.758
L892_g4417 Steinernema scapterisci L892_g4417 I 0.758
LLOJ009491 Lutzomyia longipalpis LLOJ009491 I 0.758
NfI Drosophila melanogaster FBgn0042696 D 0.758
GE14520 Drosophila yakuba FBgn0232122 I 0.758
MESCA001033 Megaselia scalaris MESCA001033 I 0.758
GK13608 Drosophila willistoni FBgn0215616 I 0.758
nRc.2.0.1.g39853 Romanomermis culicivorax nRc.2.0.1.g39853 I 0.758
TC001775 Tribolium castaneum TC001775 I 0.747
YQE_09289 Dendroctonus ponderosae YQE_09289 I 0.747
SINV21439 Solenopsis invicta SINV21439 I 0.747
ACEP19823 Atta cephalotes ACEP19823 I 0.747
NV15784 Nasonia vitripennis NV15784 I 0.747
Cflo_01240--XP_393740.3_APIME Camponotus floridanus Cflo_01240--XP_393740.3_APIME I 0.747
BGIBMGA013352 Bombyx mori BGIBMGA013352 I 0.747
D917_08921 Trichinella nativa D917_08921 I 0.747
D917_08922 Trichinella nativa D917_08922 I 0.747
nfic Xenopus tropicalis XB-GENE-484367 I 0.747
LDEC011938 Leptinotarsa decemlineata LDEC011938 I 0.747
Hsal_10682--XP_393740.3_APIME Harpegnathos saltator Hsal_10682--XP_393740.3_APIME I 0.747
HMEL003745 Heliconius melpomene HMEL003745 I 0.747
AAI70116 Xenopus laevis AAI70116 I 0.747
GB44961 Apis mellifera GB44961 I 0.747
NECAME_05767 Necator americanus NECAME_05767 N 0.736
NFIC Myotis lucifugus ENSMLUG00000006476 I 0.736
NFIC Tursiops truncatus ENSTTRG00000009660 I 0.736
HHAL002936-PA Halyomorpha halys HHAL002936-PA I 0.736
AAB38017 Xenopus laevis AAB38017 I 0.736
D918_01205 Trichuris suis D918_01205 I 0.736
NFIC Equus caballus ENSECAG00000008134 I 0.736
ENSSTOG00000024218 Ictidomys tridecemlineatus ENSSTOG00000024218 I 0.736
NFIC Bos taurus ENSBTAG00000008520 I 0.736
NFIC Canis familiaris ENSCAFG00000019246 I 0.736
NFIC Loxodonta africana ENSLAFG00000007134 I 0.736
ENSMEUG00000010629 Macropus eugenii ENSMEUG00000010629 I 0.736
BGLB002764 Biomphalaria glabrata BGLB002764 I 0.736
NFIC Dasypus novemcinctus ENSDNOG00000042450 I 0.736
CGI_10025830 Crassostrea gigas CGI_10025830 I 0.736
ENSAMEG00000005577 Ailuropoda melanoleuca ENSAMEG00000005577 I 0.736
ENSSHAG00000008822 Sarcophilus harrisii ENSSHAG00000008822 I 0.736
ENSCHOG00000006447 Choloepus hoffmanni ENSCHOG00000006447 I 0.736
TMUE_s0020006100 Trichuris muris TMUE_s0020006100 I 0.736
Myotis_brandtii_NFIC_10016328 Myotis brandtii Myotis_brandtii_NFIC_10016328 I 0.736
ENSMPUG00000003850 Mustela putorius furo ENSMPUG00000003850 I 0.736
TTRE_0000653901 Trichuris trichiura TTRE_0000653901 I 0.736
SMAR010352 Strigamia maritima SMAR010352 I 0.736
ENSP00000342859-D1 Bos grunniens ENSP00000342859-D1 I 0.736
PHUM301410 Pediculus humanus PHUM301410 I 0.736
NFIC Monodelphis domestica ENSMODG00000006935 I 0.736
L798_07165 Zootermopsis nevadensis L798_07165 I 0.736
NFIC Echinops telfairi ENSETEG00000006952 I 0.736
LotgiG215606 Lottia gigantea LotgiG215606 I 0.736
tetur26g01860 Tetranychus urticae tetur26g01860 I 0.736
NFIC Otolemur garnettii ENSOGAG00000026321 I 0.736
NFIC Procavia capensis ENSPCAG00000002205 I 0.736
NFIC Felis catus ENSFCAG00000000880 I 0.736
DAPPUDRAFT_52430 Daphnia pulex DAPPUDRAFT_52430 I 0.736
ACYPI010036 Acyrthosiphon pisum ACYPI010036 I 0.736
AMIN002133 Anopheles minimus AMIN002133 I 0.725
ASTEI06207 Anopheles stephensi ASTEI06207 I 0.725
ASIS017368 Anopheles sinensis ASIS017368 I 0.725
NFIC Gorilla gorilla ENSGGOG00000006557 I 0.725
NFIC Homo sapiens ENSG00000141905 D 0.725
NFIC Callithrix jacchus ENSCJAG00000014813 I 0.725
ENSCSAG00000011182 Chlorocebus sabaeus ENSCSAG00000011182 I 0.725
CPIJ009526 Culex quinquefasciatus CPIJ009526 I 0.725
AAEL000254 Aedes aegypti AAEL000254 I 0.725
AARA001109 Anopheles arabiensis AARA001109 I 0.725
NFIC Pan troglodytes ENSPTRG00000010261 I 0.725
CpipJ_CPIJ009526 Culex pipiens CpipJ_CPIJ009526 I 0.725
Nfic Mus musculus ENSMUSG00000055053 D 0.725
AMEM002115 Anopheles merus AMEM002115 I 0.725
ENSPPYG00000009371 Pongo abelii ENSPPYG00000009371 I 0.725
NFI Anopheles gambiae AGAP000068 I 0.725
ENSPANG00000004923 Papio anubis ENSPANG00000004923 I 0.725
ADAC002741 Anopheles darlingi ADAC002741 I 0.725
NFIC Macaca mulatta ENSMMUG00000003439 I 0.725
Nfic Rattus norvegicus ENSRNOG00000004505 I 0.725
AALB006645 Anopheles albimanus AALB006645 I 0.725
AEPI005797 Anopheles epiroticus AEPI005797 I 0.725
AFAF009296 Anopheles farauti AFAF009296 I 0.725
AFUN011569 Anopheles funestus AFUN011569 I 0.725
AMEC002310 Anopheles melas AMEC002310 I 0.725
ADIR000974 Anopheles dirus ADIR000974 I 0.725
ACUA022542 Anopheles culicifacies ACUA022542 I 0.725
ISCW004440 Ixodes scapularis ISCW004440 I 0.725
AATE000288 Anopheles atroparvus AATE000288 I 0.725
ACOM036010 Anopheles coluzzii ACOM036010 I 0.725
nfic Gasterosteus aculeatus ENSGACG00000002028 I 0.714
Nfic Dipodomys ordii ENSDORG00000002466 I 0.714
ENSMGAG00000002720 Meleagris gallopavo ENSMGAG00000002720 I 0.714
SNAPOd2T00003168001 Oikopleura dioica SNAPOd2T00003168001 I 0.714
gw.438.21.1 Branchiostoma floridae gw.438.21.1 I 0.714
fgenesh2_pg.scaffold_342000046 Branchiostoma floridae fgenesh2_pg.scaffold_342000046 I 0.714
ENSGALG00000027938 Gallus gallus ENSGALG00000027938 I 0.714
CJA00808 Caenorhabditis japonica CJA00808 N 0.714
Pvit_08116 Pogona vitticeps Pvit_08116 I 0.703
NFIC Taeniopygia guttata ENSTGUG00000000182 I 0.703
Aan_R011678 Calypte anna Aan_R011678 I 0.703
ENSLOCG00000001284 Lepisosteus oculatus ENSLOCG00000001284 I 0.703
ENSLACG00000014913 Latimeria chalumnae ENSLACG00000014913 I 0.703
ENSFALG00000011533 Ficedula albicollis ENSFALG00000011533 I 0.703
nfic Danio rerio ENSDARG00000043210 I 0.703
Afo_R007642 Aptenodytes forsteri Afo_R007642 I 0.703
AAC25159 Xenopus laevis AAC25159 I 0.703
AAC25161 Xenopus laevis AAC25161 I 0.703
Gfo_R007599 Geospiza fortis Gfo_R007599 I 0.703
Cmyd_10002384 Chelonia mydas Cmyd_10002384 I 0.703
Alligator_sinensis_CCG000434.1 Alligator sinensis Alligator_sinensis_CCG000434.1 I 0.703
RPRC005635 Rhodnius prolixus RPRC005635 I 0.702