scaffold324-EXSNAP2012.31 (Pristionchus exspectatus)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 scaffold324-EXSNAP2012.31 T325891_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NfI
M03968_2.00 		Drosophila melanogaster
YTGGCDNNNHGCCAR
YTGGCDNNNHGCCAR		 SELEX
Nitta et al.(2015)
NfI_1 		0.758 0.758
NFIC
M05745_2.00 		Homo sapiens
NTTGGCNNNNTGCCARN
NYTGGCANNNNGCCAAN		 SELEX
Yin et al.(2017)
NFIC_FL_HT-SELEX 		0.725 0.725
NFIC
M08164_2.00 		Homo sapiens
NNCTTGGCANN
NNTGCCAAGNN		 ChIP-seq
Mathelier et al.(2014)
MA0161.2 		0.725 0.725
NFIC
M09378_2.00 		Homo sapiens
BYTGGMHBYNDKCCMRV
BYKGGMHNRVDKCCARV		 Misc
Kulakovskiy et al.(2013)
NFIC_HUMAN.H11MO.0.A 		0.725 0.725
Nfic
M09385_2.00 		Mus musculus
NBYTGGCWN
NWGCCARVN		 Misc
Kulakovskiy et al.(2013)
NFIC_MOUSE.H11MO.0.A 		0.725 0.725
NFIC
M09635_2.00 		Homo sapiens
BYTGSCAV
BTGSCARV		 Misc
Heinz et al.(2010)
LNCaP-NF1_Unpublished 		0.725 0.725
NFIC
M09636_2.00 		Homo sapiens
BYTGGCHNNNDGCCAR
YTGGCHNNNDGCCARV		 Misc
Heinz et al.(2010)
LNCAP-NF1_Unpublished 		0.725 0.725
NFIC
M11278_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CTF1_01 		0.725 0.725
NFIC
M11279_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1C_Q6 		0.725 0.725
NFIC
M05746_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIC_FL_Methyl-HT-SELEX 		0.725 0.725
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold324-EXSNAP2012.31 SMAD 806 910

Links

Other SMAD family TFs
Other Pristionchus exspectatus TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PPA18485 Pristionchus pacificus PPA18485 I 1.000
CGOC_0000769801 Cylicostephanus goldi CGOC_0000769801 I 0.894
SVUK_0000435801 Strongylus vulgaris SVUK_0000435801 I 0.894
TCNE_0001032701 Toxocara canis TCNE_0001032701 I 0.802
EVEC_0001120201 Enterobius vermicularis EVEC_0001120201 I 0.802
ASIM_0001221201 Anisakis simplex ASIM_0001221201 I 0.802
ASU_05356 Ascaris suum ASU_05356 I 0.802
EEL_0000990501 Elaeophora elaphi EEL_0000990501 I 0.791
HPBE_0002427601 Heligmosomoides bakeri HPBE_0002427601 I 0.791
DICVIV_06041 Dictyocaulus viviparus DICVIV_06041 I 0.791
ACOC_0000978701 Angiostrongylus costaricensis ACOC_0000978701 I 0.791
WBGene00247194 Onchocerca volvulus WBGene00247194 I 0.791
LOAG_08303 Loa loa LOAG_08303 I 0.791
ACAC_0000812601 Angiostrongylus cantonensis ACAC_0000812601 I 0.791
nAv.1.0.1.g02718 Acanthocheilonema viteae nAv.1.0.1.g02718 I 0.791
ANCCAN_03078 Ancylostoma caninum ANCCAN_03078 I 0.791
ANCDUO_02770 Ancylostoma duodenale ANCDUO_02770 I 0.791
nOo.2.0.1.g12948 Onchocerca ochengi nOo.2.0.1.g12948 I 0.791
nLs.2.1.2.g06746 Litomosoides sigmodontis nLs.2.1.2.g06746 I 0.791
OFLC_0001047301 Onchocerca flexuosa OFLC_0001047301 I 0.791
SMUV_0000807101 Syphacia muris SMUV_0000807101 I 0.791
Bm7659 Brugia malayi Bm7659 I 0.791
nDi.2.2.2.g05388 Dirofilaria immitis nDi.2.2.2.g05388 I 0.791
WUBG_02198 Wuchereria bancrofti WUBG_02198 I 0.791
HCOI01452900 Haemonchus contortus HCOI01452900 I 0.780
L898_g32383 Steinernema monticolum L898_g32383 I 0.780
L889_g1991 Steinernema feltiae L889_g1991 I 0.780
MhA1_Contig410.frz3.gene15 Meloidogyne hapla MhA1_Contig410.frz3.gene15 I 0.780
DME_0000465201 Dracunculus medinensis DME_0000465201 I 0.769
L893_g18810 Steinernema glaseri L893_g18810 I 0.769
BXY_1713100 Bursaphelenchus xylophilus BXY_1713100 I 0.769
LCUP004691 Lucilia cuprina LCUP004691 I 0.758
GJ21334 Drosophila virilis FBgn0208464 I 0.758
NfI Drosophila melanogaster FBgn0042696 D 0.758
GK13608 Drosophila willistoni FBgn0215616 I 0.758
GE14520 Drosophila yakuba FBgn0232122 I 0.758
GF21690 Drosophila ananassae FBgn0098690 I 0.758
GI14107 Drosophila mojavensis FBgn0136861 I 0.758
GL18152 Drosophila persimilis FBgn0155755 I 0.758
GH23980 Drosophila grimshawi FBgn0131437 I 0.758
GG16454 Drosophila erecta FBgn0108685 I 0.758
GM26787 Drosophila sechellia FBgn0181640 I 0.758
MESCA001033 Megaselia scalaris MESCA001033 I 0.758
GD24387 Drosophila simulans FBgn0195728 I 0.758
nRc.2.0.1.g39853 Romanomermis culicivorax nRc.2.0.1.g39853 I 0.758
L596_g9152 Steinernema carpocapsae L596_g9152 I 0.758
MDOA004700 Musca domestica MDOA004700 I 0.758
L892_g4417 Steinernema scapterisci L892_g4417 I 0.758
LLOJ009491 Lutzomyia longipalpis LLOJ009491 I 0.758
YQE_09289 Dendroctonus ponderosae YQE_09289 I 0.747
SINV21439 Solenopsis invicta SINV21439 I 0.747
NV15784 Nasonia vitripennis NV15784 I 0.747
Cflo_01240--XP_393740.3_APIME Camponotus floridanus Cflo_01240--XP_393740.3_APIME I 0.747
Hsal_10682--XP_393740.3_APIME Harpegnathos saltator Hsal_10682--XP_393740.3_APIME I 0.747
GB44961 Apis mellifera GB44961 I 0.747
ACEP19823 Atta cephalotes ACEP19823 I 0.747
HMEL003745 Heliconius melpomene HMEL003745 I 0.747
LDEC011938 Leptinotarsa decemlineata LDEC011938 I 0.747
D917_08922 Trichinella nativa D917_08922 I 0.747
D917_08921 Trichinella nativa D917_08921 I 0.747
BGIBMGA013352 Bombyx mori BGIBMGA013352 I 0.747
TC001775 Tribolium castaneum TC001775 I 0.747
nfic Xenopus tropicalis XB-GENE-484367 I 0.747
AAI70116 Xenopus laevis AAI70116 I 0.747
NECAME_05767 Necator americanus NECAME_05767 N 0.736
D918_01205 Trichuris suis D918_01205 I 0.736
TTRE_0000653901 Trichuris trichiura TTRE_0000653901 I 0.736
TMUE_s0020006100 Trichuris muris TMUE_s0020006100 I 0.736
AAB38017 Xenopus laevis AAB38017 I 0.736
HHAL002936-PA Halyomorpha halys HHAL002936-PA I 0.736
BGLB002764 Biomphalaria glabrata BGLB002764 I 0.736
ENSP00000342859-D1 Bos grunniens ENSP00000342859-D1 I 0.736
Myotis_brandtii_NFIC_10016328 Myotis brandtii Myotis_brandtii_NFIC_10016328 I 0.736
tetur26g01860 Tetranychus urticae tetur26g01860 I 0.736
NFIC Felis catus ENSFCAG00000000880 I 0.736
NFIC Loxodonta africana ENSLAFG00000007134 I 0.736
NFIC Echinops telfairi ENSETEG00000006952 I 0.736
NFIC Equus caballus ENSECAG00000008134 I 0.736
ENSSTOG00000024218 Ictidomys tridecemlineatus ENSSTOG00000024218 I 0.736
ENSSHAG00000008822 Sarcophilus harrisii ENSSHAG00000008822 I 0.736
ENSMEUG00000010629 Macropus eugenii ENSMEUG00000010629 I 0.736
NFIC Myotis lucifugus ENSMLUG00000006476 I 0.736
NFIC Procavia capensis ENSPCAG00000002205 I 0.736
SMAR010352 Strigamia maritima SMAR010352 I 0.736
NFIC Otolemur garnettii ENSOGAG00000026321 I 0.736
ENSMPUG00000003850 Mustela putorius furo ENSMPUG00000003850 I 0.736
NFIC Monodelphis domestica ENSMODG00000006935 I 0.736
ENSCHOG00000006447 Choloepus hoffmanni ENSCHOG00000006447 I 0.736
NFIC Dasypus novemcinctus ENSDNOG00000042450 I 0.736
PHUM301410 Pediculus humanus PHUM301410 I 0.736
L798_07165 Zootermopsis nevadensis L798_07165 I 0.736
NFIC Canis familiaris ENSCAFG00000019246 I 0.736
LotgiG215606 Lottia gigantea LotgiG215606 I 0.736
CGI_10025830 Crassostrea gigas CGI_10025830 I 0.736
ENSAMEG00000005577 Ailuropoda melanoleuca ENSAMEG00000005577 I 0.736
DAPPUDRAFT_52430 Daphnia pulex DAPPUDRAFT_52430 I 0.736
ACYPI010036 Acyrthosiphon pisum ACYPI010036 I 0.736
NFIC Bos taurus ENSBTAG00000008520 I 0.736
NFIC Tursiops truncatus ENSTTRG00000009660 I 0.736
AAEL000254 Aedes aegypti AAEL000254 I 0.725
ADAC002741 Anopheles darlingi ADAC002741 I 0.725
ENSPANG00000004923 Papio anubis ENSPANG00000004923 I 0.725
NFI Anopheles gambiae AGAP000068 I 0.725
Nfic Mus musculus ENSMUSG00000055053 D 0.725
NFIC Gorilla gorilla ENSGGOG00000006557 I 0.725
ENSCSAG00000011182 Chlorocebus sabaeus ENSCSAG00000011182 I 0.725
NFIC Callithrix jacchus ENSCJAG00000014813 I 0.725
ASIS017368 Anopheles sinensis ASIS017368 I 0.725
NFIC Homo sapiens ENSG00000141905 D 0.725
CPIJ009526 Culex quinquefasciatus CPIJ009526 I 0.725
NFIC Macaca mulatta ENSMMUG00000003439 I 0.725
ASTEI06207 Anopheles stephensi ASTEI06207 I 0.725
ISCW004440 Ixodes scapularis ISCW004440 I 0.725
AARA001109 Anopheles arabiensis AARA001109 I 0.725
CpipJ_CPIJ009526 Culex pipiens CpipJ_CPIJ009526 I 0.725
ENSPPYG00000009371 Pongo abelii ENSPPYG00000009371 I 0.725
AMIN002133 Anopheles minimus AMIN002133 I 0.725
Nfic Rattus norvegicus ENSRNOG00000004505 I 0.725
NFIC Pan troglodytes ENSPTRG00000010261 I 0.725
AATE000288 Anopheles atroparvus AATE000288 I 0.725
AALB006645 Anopheles albimanus AALB006645 I 0.725
AFAF009296 Anopheles farauti AFAF009296 I 0.725
AMEC002310 Anopheles melas AMEC002310 I 0.725
AMEM002115 Anopheles merus AMEM002115 I 0.725
AEPI005797 Anopheles epiroticus AEPI005797 I 0.725
AFUN011569 Anopheles funestus AFUN011569 I 0.725
ACUA022542 Anopheles culicifacies ACUA022542 I 0.725
ADIR000974 Anopheles dirus ADIR000974 I 0.725
ACOM036010 Anopheles coluzzii ACOM036010 I 0.725
Nfic Dipodomys ordii ENSDORG00000002466 I 0.714
nfic Gasterosteus aculeatus ENSGACG00000002028 I 0.714
fgenesh2_pg.scaffold_342000046 Branchiostoma floridae fgenesh2_pg.scaffold_342000046 I 0.714
gw.438.21.1 Branchiostoma floridae gw.438.21.1 I 0.714
ENSGALG00000027938 Gallus gallus ENSGALG00000027938 I 0.714
SNAPOd2T00003168001 Oikopleura dioica SNAPOd2T00003168001 I 0.714
ENSMGAG00000002720 Meleagris gallopavo ENSMGAG00000002720 I 0.714
CJA00808 Caenorhabditis japonica CJA00808 N 0.714
Gfo_R007599 Geospiza fortis Gfo_R007599 I 0.703
Afo_R007642 Aptenodytes forsteri Afo_R007642 I 0.703
Aan_R011678 Calypte anna Aan_R011678 I 0.703
Alligator_sinensis_CCG000434.1 Alligator sinensis Alligator_sinensis_CCG000434.1 I 0.703
Cmyd_10002384 Chelonia mydas Cmyd_10002384 I 0.703
ENSFALG00000011533 Ficedula albicollis ENSFALG00000011533 I 0.703
ENSLACG00000014913 Latimeria chalumnae ENSLACG00000014913 I 0.703
ENSLOCG00000001284 Lepisosteus oculatus ENSLOCG00000001284 I 0.703
AAC25161 Xenopus laevis AAC25161 I 0.703
nfic Danio rerio ENSDARG00000043210 I 0.703
NFIC Taeniopygia guttata ENSTGUG00000000182 I 0.703
AAC25159 Xenopus laevis AAC25159 I 0.703
Pvit_08116 Pogona vitticeps Pvit_08116 I 0.703
RPRC005635 Rhodnius prolixus RPRC005635 I 0.702