YQE_07842 (Dendroctonus ponderosae)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 YQE_07842 T325243_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mad
M06446_2.00
Drosophila melanogaster
GYGHCGBCVS

SBGVCGDCRC
B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648
1.000 1.000
Mad
M08427_2.00
Drosophila melanogaster
SNGRCGMSRVSRBNS

SNVYSBYSKCGYCNS
ChIP-chip
Mathelier et al.(2014)
MA0535.1
1.000 1.000
Mad
M09692_2.00
Drosophila melanogaster
KCBGSHGKCGCSNC

GNSGCGMCDSCVGM
Misc
Kulakovskiy et al.(2009)
Mad
1.000 1.000
Mad
M11293_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$MAD_Q6
1.000 1.000
SMAD9
M11274_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_01
0.917 0.917
Smad9
M11290_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_02
0.917 0.917
Smad9
M11289_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_03
0.917 0.917
SMAD5
M05743_2.00
Homo sapiens
YGTCTAGACW

WGTCTAGACR
SELEX
Yin et al.(2017)
SMAD5_eDBD_HT-SELEX
0.861 0.861
SMAD1
M11286_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_01
0.861 0.861
SMAD1
M11287_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_Q6
0.861 0.861
Smad5
M11288_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_01
0.861 0.861
SMAD5
M11271_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_02
0.861 0.861
Smad5
M11292_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_03
0.861 0.861
SMAD5
M11272_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_Q5_01
0.861 0.861
SMAD5
M11273_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_Q5
0.861 0.861
SMAD5
M05744_2.00
Homo sapiens
CGTCTAGACR

YGTCTAGACG
SELEX
Yin et al.(2017)
SMAD5_eDBD_Methyl-HT-SELEX
0.861 0.861
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN75595 SMAD 61 96

Links

Other SMAD family TFs
Other Dendroctonus ponderosae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SMAD1 Homo sapiens ENSG00000170365 D 0.862