D918_06928 (Trichuris suis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 D918_06928 T325642_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mad
M06446_2.00
Drosophila melanogaster
GYGHCGBCVS

SBGVCGDCRC
B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648
0.882 0.882
Mad
M08427_2.00
Drosophila melanogaster
SNGRCGMSRVSRBNS

SNVYSBYSKCGYCNS
ChIP-chip
Mathelier et al.(2014)
MA0535.1
0.882 0.882
Mad
M09692_2.00
Drosophila melanogaster
KCBGSHGKCGCSNC

GNSGCGMCDSCVGM
Misc
Kulakovskiy et al.(2009)
Mad
0.882 0.882
Mad
M11293_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$MAD_Q6
0.882 0.882
Smad5
M11288_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_01
0.853 0.853
Smad5
M11292_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD5_03
0.853 0.853
SMAD9
M11274_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_01
0.853 0.853
Smad9
M11290_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_02
0.853 0.853
Smad9
M11289_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_03
0.853 0.853
SMAD1
M11286_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_01
0.843 0.843
SMAD1
M11287_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD1_Q6
0.843 0.843
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D918_06928 SMAD 21 122

Links

Other SMAD family TFs
Other Trichuris suis TFs

492 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R005479 Calypte anna Aan_R005479 N 0.000
ACEP25970 Atta cephalotes ACEP25970 N 0.000
ACOM023832 Anopheles coluzzii ACOM023832 N 0.000
ANCCAN_16550 Ancylostoma caninum ANCCAN_16550 N 0.000
ARID5A Otolemur garnettii ENSOGAG00000004116 I 0.000
ARID5A Homo sapiens ENSG00000196843 I 0.000
ARID5A Gorilla gorilla ENSGGOG00000017068 I 0.000
ARID5A Loxodonta africana ENSLAFG00000009162 I 0.000
ARID5A Microcebus murinus ENSMICG00000001964 I 0.000
Arid5a Mus musculus ENSMUSG00000037447 D 0.000
ARID5A Pan troglodytes ENSPTRG00000012234 I 0.000
ARID5A Erinaceus europaeus ENSEEUG00000008247 I 0.000
Arid5a Dipodomys ordii ENSDORG00000002540 I 0.000
Arid5a Rattus norvegicus ENSRNOG00000015382 D 0.000
ARID5A Sus scrofa ENSSSCG00000008123 I 0.000
ARID5A Cavia porcellus ENSCPOG00000026444 I 0.000
ARID5A Callithrix jacchus ENSCJAG00000007759 I 0.000
ARID5A Bos taurus ENSBTAG00000014090 I 0.000
ARID5A Procavia capensis ENSPCAG00000006363 I 0.000
ARID5B Tursiops truncatus ENSTTRG00000009968 N 0.000
BOTBODRAFT_174219 Botryobasidium botryosum BOTBODRAFT_174219 N 0.000
BOTBODRAFT_182015 Botryobasidium botryosum BOTBODRAFT_182015 N 0.000
Bra015737 Brassica rapa Bra015737 N 0.000
CapteG108943 Capitella teleta CapteG108943 N 0.000
Cflo_11029--XP_001120115.1_APIME Camponotus floridanus Cflo_11029--XP_001120115.1_APIME N 0.000
ENSCJAG00000034027 Callithrix jacchus ENSCJAG00000034027 N 0.000
ENSCSAG00000017355 Chlorocebus sabaeus ENSCSAG00000017355 I 0.000
ENSCSAVG00000005880 Ciona savignyi ENSCSAVG00000005880 N 0.000
ENSNLEG00000007764 Nomascus leucogenys ENSNLEG00000007764 N 0.000
ENSOARG00000013883 Ovis aries ENSOARG00000013883 N 0.000
ENSPPYG00000012072 Pongo abelii ENSPPYG00000012072 I 0.000
evm.TU.supercontig_70.18 Carica papaya evm.TU.supercontig_70.18 N 0.000
e_gw1.8.356.1 Monosiga brevicollis e_gw1.8.356.1 N 0.000
GD20218 Drosophila simulans FBgn0191696 N 0.000
gene11760-v1.0-hybrid Fragaria vesca gene11760-v1.0-hybrid N 0.000
Genemark.397_g Heterobasidion annosum Genemark.397_g N 0.000
Genemark1.2983_g Coccomyxa subellipsoidea C169 Genemark1.2983_g N 0.000
Gfo_R015467 Geospiza fortis Gfo_R015467 N 0.000
GK21672 Drosophila willistoni FBgn0223657 N 0.000
GL12242 Drosophila persimilis FBgn0149849 N 0.000
gw1.8.90.1 Volvox carteri gw1.8.90.1 N 0.000
HCOI00647600 Haemonchus contortus HCOI00647600 N 0.000
HHAL003716-PA Halyomorpha halys HHAL003716-PA N 0.000
HPBE_0000220801 Heligmosomoides bakeri HPBE_0000220801 N 0.000
Hsal_11763--XP_001120115.1_APIME Harpegnathos saltator Hsal_11763--XP_001120115.1_APIME N 0.000
MCINX010724 Melitaea cinxia MCINX010724 N 0.000
MESCA003685 Megaselia scalaris MESCA003685 N 0.000
MLOC_7381 Hordeum vulgare MLOC_7381 N 0.000
NECAME_01264 Necator americanus NECAME_01264 N 0.000
OESDEN_17751 Oesophagostomum dentatum OESDEN_17751 N 0.000
orange1.1g009744m.g Citrus sinensis orange1.1g009744m.g I 0.000
ORGLA07G0233500 Oryza glaberrima ORGLA07G0233500 N 0.000
Pavir.Da00612 Panicum virgatum Pavir.Da00612 N 0.000
Pavir.J25952 Panicum virgatum Pavir.J25952 N 0.000
PDK_20s1315202g001 Phoenix dactylifera PDK_20s1315202g001 N 0.000
PGSC0003DMG400047019 Solanum tuberosum PGSC0003DMG400047019 N 0.000
PHACADRAFT_251691 Phanerochaete carnosa PHACADRAFT_251691 N 0.000
PHUM027610 Pediculus humanus PHUM027610 N 0.000
Pvit_06674 Pogona vitticeps Pvit_06674 N 0.000
SBAD_0000429301 Soboliphyme baturini SBAD_0000429301 N 0.000
Sjc_0111140 Schistosoma japonicum Sjc_0111140 N 0.000
SMTD_0000131801 Schistosoma mattheei SMTD_0000131801 N 0.000
SMTD_0001549501 Schistosoma mattheei SMTD_0001549501 N 0.000
SPER_0000246801 Spirometra erinaceieuropaei SPER_0000246801 N 0.000
SPER_0003392901 Spirometra erinaceieuropaei SPER_0003392901 N 0.000
SPER_0003827801 Spirometra erinaceieuropaei SPER_0003827801 N 0.000
SPU_003500 Strongylocentrotus purpuratus SPU_003500 N 0.000
SROB_0001561301 Schistosoma rodhaini SROB_0001561301 N 0.000
SVUK_0000804601 Strongylus vulgaris SVUK_0000804601 N 0.000
TELCIR_22728 Teladorsagia circumcincta TELCIR_22728 N 0.000
TRE_0000846701 Trichobilharzia regenti TRE_0000846701 N 0.000
TRIUR3_29596 Triticum urartu TRIUR3_29596 N 0.000
YQE_11989 Dendroctonus ponderosae YQE_11989 N 0.000