AT2G34450 (Arabidopsis thaliana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 AT2G34450 T326477_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G34450.1 Sox 63 132
AT2G34450.2 Sox 63 133
AT2G34450.3 Sox 63 132
AT2G34450.4 Sox 63 132

Links

Other Sox family TFs
Other Arabidopsis thaliana TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POU6F1 Homo sapiens ENSG00000184271 D 0.000
ENSMMUG00000001139 Macaca mulatta ENSMMUG00000001139 I 0.000
POU6F1 Monodelphis domestica ENSMODG00000018676 I 0.000
ENSMPUG00000007990 Mustela putorius furo ENSMPUG00000007990 I 0.000
ENSNLEG00000017777 Nomascus leucogenys ENSNLEG00000017777 I 0.000
POU6F1 Otolemur garnettii ENSOGAG00000007973 I 0.000
ENSPPYG00000004523 Pongo abelii ENSPPYG00000004523 I 0.000
POU6F1 Pan troglodytes ENSPTRG00000004950 I 0.000
Pou6f1 Rattus norvegicus ENSRNOG00000004595 I 0.000
POU6F1 Sorex araneus ENSSARG00000003778 I 0.000
ENSSTOG00000009140 Ictidomys tridecemlineatus ENSSTOG00000009140 I 0.000
POU6F1 Tursiops truncatus ENSTTRG00000013841 I 0.000
ENSMICG00000009560 Microcebus murinus ENSMICG00000009560 I 0.000
ENSMEUG00000001957 Macropus eugenii ENSMEUG00000001957 I 0.000
ENSAMEG00000002092 Ailuropoda melanoleuca ENSAMEG00000002092 I 0.000
POU6F1 Canis familiaris ENSCAFG00000007790 I 0.000
POU6F1 Callithrix jacchus ENSCJAG00000017646 I 0.000
ENSCSAG00000005904 Chlorocebus sabaeus ENSCSAG00000005904 I 0.000
POU6F1 Dasypus novemcinctus ENSDNOG00000009291 I 0.000
ENSDORG00000014216 Dipodomys ordii ENSDORG00000014216 I 0.000
POU6F1 Equus caballus ENSECAG00000024200 I 0.000
POU6F1 Erinaceus europaeus ENSEEUG00000014085 I 0.000
ENSETEG00000018248 Echinops telfairi ENSETEG00000018248 I 0.000
POU6F1 Felis catus ENSFCAG00000004408 I 0.000
POU6F1 Loxodonta africana ENSLAFG00000020901 I 0.000
ENSP00000373895 Macaca fascicularis ENSP00000373895 I 0.000