GALMADRAFT_775072 (Galerina marginata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GALMADRAFT_775072 T329981_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.422 0.426
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.422 0.426
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.422 0.426
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.422 0.426
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.422 0.426
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDR72140 Sox 41 109

Links

Other Sox family TFs
Other Galerina marginata TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M413DRAFT_24002 Hebeloma cylindrosporum M413DRAFT_24002 I 0.474
Kpol_401p4 Vanderwaltozyma polyspora Kpol_401p4 I 0.473
gw1.2.1019.1 Mycosphaerella graminicola gw1.2.1019.1 I 0.470
CY34DRAFT_28710 Suillus luteus CY34DRAFT_28710 I 0.470
Mycgr3G19569 Zymoseptoria tritici Mycgr3G19569 I 0.470
HETIRDRAFT_18788 Heterobasidion irregulare HETIRDRAFT_18788 I 0.466
gw1.11.527.1 Heterobasidion annosum gw1.11.527.1 I 0.466
GYMLUDRAFT_162520 Gymnopus luxurians GYMLUDRAFT_162520 I 0.466
gw1.11.531.1 Heterobasidion annosum gw1.11.531.1 I 0.466
HETIRDRAFT_18769 Heterobasidion irregulare HETIRDRAFT_18769 I 0.466
CC1G_06427 Coprinopsis cinerea CC1G_06427 N 0.462
Moror_17490 Moniliophthora roreri Moror_17490 I 0.456
M408DRAFT_11440 Serendipita vermifera M408DRAFT_11440 I 0.455
M378DRAFT_12668 Amanita muscaria M378DRAFT_12668 N 0.453
SCHCODRAFT_230584 Schizophyllum commune SCHCODRAFT_230584 I 0.453
SCHCODRAFT_255863 Schizophyllum commune SCHCODRAFT_255863 I 0.452
AGABI2DRAFT_56847 Agaricus bisporus AGABI2DRAFT_56847 N 0.452
GALMADRAFT_33159 Galerina marginata GALMADRAFT_33159 I 0.450
LACBIDRAFT_311738 Laccaria bicolor LACBIDRAFT_311738 I 0.446
Kpol_1062p60 Vanderwaltozyma polyspora Kpol_1062p60 I 0.445
JL09_g4172 Pichia kudriavzevii JL09_g4172 I 0.445
FOMPIDRAFT_1048193 Fomitopsis pinicola FOMPIDRAFT_1048193 I 0.445
SAKL0F03872g Lachancea kluyveri SAKL0F03872g I 0.445
TBLA_0J01680 Tetrapisispora blattae TBLA_0J01680 I 0.445
Moror_6135 Moniliophthora roreri Moror_6135 I 0.441
JAAARDRAFT_117714 Jaapia argillacea JAAARDRAFT_117714 I 0.440
fgenesh1_pg.C_scaffold_2000484 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000484 N 0.440
SPER_0001384501 Spirometra erinaceieuropaei SPER_0001384501 I 0.439
SSLN_0001637801 Schistocephalus solidus SSLN_0001637801 I 0.439
BN946_scf184940.g27 Trametes cinnabarina BN946_scf184940.g27 I 0.438
Kwal_21061 Kluyveromyces waltii Kwal_21061 I 0.436
PHACADRAFT_54114 Phanerochaete carnosa PHACADRAFT_54114 N 0.436
KLTH0F13926g Kluyveromyces thermotolerans KLTH0F13926g I 0.436
KLTH0F13926g Lachancea thermotolerans KLTH0F13926g I 0.436
SCHCODRAFT_111770 Schizophyllum commune SCHCODRAFT_111770 I 0.435
SCHCODRAFT_113446 Schizophyllum commune SCHCODRAFT_113446 I 0.435
SCHCODRAFT_114945 Schizophyllum commune SCHCODRAFT_114945 I 0.435
AGABI2DRAFT_46840 Agaricus bisporus AGABI2DRAFT_46840 I 0.435
GALMADRAFT_133211 Galerina marginata GALMADRAFT_133211 I 0.434
Moror_8177 Moniliophthora roreri Moror_8177 I 0.432
K443DRAFT_126060 Laccaria amethystina K443DRAFT_126060 I 0.432
LACBIDRAFT_327972 Laccaria bicolor LACBIDRAFT_327972 I 0.432
HETIRDRAFT_18754 Heterobasidion irregulare HETIRDRAFT_18754 I 0.431
SCHCODRAFT_238903 Schizophyllum commune SCHCODRAFT_238903 I 0.431
gw1.15.231.1 Heterobasidion annosum gw1.15.231.1 I 0.431
PAXRUDRAFT_95391 Paxillus rubicundulus PAXRUDRAFT_95391 I 0.430
GLOTRDRAFT_98119 Gloeophyllum trabeum GLOTRDRAFT_98119 I 0.430
CC1G_13679 Coprinopsis cinerea CC1G_13679 I 0.430
SCHCODRAFT_114988 Schizophyllum commune SCHCODRAFT_114988 I 0.430
JAAARDRAFT_209433 Jaapia argillacea JAAARDRAFT_209433 I 0.430
PIIN_02385 Piriformospora indica PIIN_02385 N 0.428
HPODL_00225 Ogataea parapolymorpha HPODL_00225 I 0.428
M408DRAFT_328232 Serendipita vermifera M408DRAFT_328232 N 0.428
M408DRAFT_332605 Serendipita vermifera M408DRAFT_332605 N 0.428
KAFR_0H00950 Kazachstania africana KAFR_0H00950 I 0.428
SCLCIDRAFT_81131 Scleroderma citrinum SCLCIDRAFT_81131 I 0.427
NDAI_0A05180 Naumovozyma dairenensis NDAI_0A05180 I 0.426
MGYG_06874 Microsporum gypseum MGYG_06874 I 0.425
MCYG_06419 Arthroderma otae MCYG_06419 I 0.425
MCYG_06419 Microsporum canis MCYG_06419 I 0.425
TESG_05246 Trichophyton tonsurans TESG_05246 I 0.425
H101_01550 Trichophyton interdigitale H101_01550 I 0.425
CERSUDRAFT_118854 Ceriporiopsis subvermispora CERSUDRAFT_118854 I 0.425
SAKL0B07656g Lachancea kluyveri SAKL0B07656g I 0.423
SU7_3656 Saccharomyces arboricola SU7_3656 I 0.422
22516_YPR065W Saccharomyces mikatae 22516_YPR065W I 0.422
KNAG_0H00720 Kazachstania naganishii KNAG_0H00720 I 0.422
SMRZ_0000554201 Schistosoma margrebowiei SMRZ_0000554201 I 0.422
23192_YPR065W Saccharomyces paradoxus 23192_YPR065W I 0.422
ROX1 Saccharomyces cerevisiae YPR065W D 0.422
PHLGIDRAFT_46949 Phlebiopsis gigantea PHLGIDRAFT_46949 I 0.421
GALMADRAFT_246110 Galerina marginata GALMADRAFT_246110 I 0.421
Scas_Contig667.28 Saccharomyces castellii Scas_Contig667.28 I 0.420
AGOS_AAR026W Ashbya gossypii AGOS_AAR026W I 0.420
PISMIDRAFT_31667 Pisolithus microcarpus PISMIDRAFT_31667 I 0.420
NCAS_0A11120 Naumovozyma castellii NCAS_0A11120 I 0.420
HNAJ_0000181101 Hymenolepis nana HNAJ_0000181101 I 0.419
TsM_000697900 Taenia solium TsM_000697900 I 0.419
K437DRAFT_265905 Tilletiaria anomala K437DRAFT_265905 I 0.419
M404DRAFT_69899 Pisolithus tinctorius M404DRAFT_69899 I 0.419
HmN_000494900 Hymenolepis microstoma HmN_000494900 I 0.419
EmuJ_000437800 Echinococcus multilocularis EmuJ_000437800 I 0.419
ECANG7_01540 Echinococcus canadensis ECANG7_01540 I 0.419
T265_01843 Opisthorchis viverrini T265_01843 I 0.419
TASK_0000729701 Taenia asiatica TASK_0000729701 I 0.419
Smp_076600 Schistosoma mansoni Smp_076600 I 0.419
csin107154 Clonorchis sinensis csin107154 I 0.419
NCAS_0E02010 Naumovozyma castellii NCAS_0E02010 I 0.417
Scas_Contig614.4 Saccharomyces castellii Scas_Contig614.4 I 0.417
NDAI_0E03570 Naumovozyma dairenensis NDAI_0E03570 I 0.417
LELG_00108 Lodderomyces elongisporus LELG_00108 I 0.417
KAFR_0G02830 Kazachstania africana KAFR_0G02830 I 0.417
GALMADRAFT_213842 Galerina marginata GALMADRAFT_213842 I 0.417
CAGL0D05434g Candida glabrata CAGL0D05434g I 0.417
FIBRA_03355 Fibroporia radiculosa FIBRA_03355 I 0.416
PLEOSDRAFT_1081694 Pleurotus ostreatus PLEOSDRAFT_1081694 I 0.416
UREG_05111 Uncinocarpus reesii UREG_05111 I 0.416
GLOINDRAFT_346310 Rhizophagus irregularis GLOINDRAFT_346310 I 0.415
PAS_chr2-1_0017 Komagataella pastoris PAS_chr2-1_0017 I 0.415
ZYRO0D15312g Zygosaccharomyces rouxii ZYRO0D15312g I 0.415
ZBAI_06138 Zygosaccharomyces bailii ZBAI_06138 I 0.415
XP_002490896.1 Pichia pastoris XP_002490896.1 I 0.415
ZBAI_00827 Zygosaccharomyces bailii ZBAI_00827 I 0.415