GLOINDRAFT_346310 (Rhizophagus irregularis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLOINDRAFT_346310 T330138_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ste11
M11342_2.00 		Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH		 Transfac
Matys et al.(2006)
F$STE11_01 		0.466 0.353
ste11
M11343_2.00 		Schizosaccharomyces pombe Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$STE11_02 		0.466 0.353
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.426 0.324
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.426 0.324
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.426 0.324
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.426 0.324
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.426 0.324
Sox14
M03971_2.00 		Drosophila melanogaster
BTGTWCGGTR
YACCGWACAV		 SELEX
Nitta et al.(2015)
Sox14_1 		0.417 0.265
Sox14
M03972_2.00 		Drosophila melanogaster
VACAATDNCATTGTB
VACAATGNHATTGTB		 SELEX
Nitta et al.(2015)
Sox14_2 		0.417 0.265
Sox14
M06449_2.00 		Drosophila melanogaster
VYYCTTTGTYC
GRACAAAGRRB		 B1H
Zhu et al.(2011)
Sox14_SANGER_10_FBgn0005612 		0.417 0.265
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESA14930 Sox 45 112

Links

Other Sox family TFs
Other Rhizophagus irregularis TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLOINDRAFT_44351 Rhizophagus irregularis GLOINDRAFT_44351 I 0.685
GLOINDRAFT_341245 Rhizophagus irregularis GLOINDRAFT_341245 N 0.575
GLOINDRAFT_23582 Rhizophagus irregularis GLOINDRAFT_23582 N 0.549
GLOINDRAFT_10087 Rhizophagus irregularis GLOINDRAFT_10087 N 0.515
GLOINDRAFT_13874 Rhizophagus irregularis GLOINDRAFT_13874 N 0.500
YALI0_D22660g Yarrowia lipolytica YALI0_D22660g I 0.482
JL09_g4172 Pichia kudriavzevii JL09_g4172 I 0.476
GLOINDRAFT_30433 Rhizophagus irregularis GLOINDRAFT_30433 N 0.474
UCREL1_2263 Eutypa lata UCREL1_2263 I 0.469
PLEOSDRAFT_1081881 Pleurotus ostreatus PLEOSDRAFT_1081881 I 0.469
Kpol_1062p60 Vanderwaltozyma polyspora Kpol_1062p60 I 0.469
ste11 Schizosaccharomyces pombe SPBC32C12.02 D 0.466
SPOG_03188 Schizosaccharomyces cryophilus SPOG_03188 I 0.466
SOCG_01448 Schizosaccharomyces octosporus SOCG_01448 I 0.466
TTRE_0000926501 Trichuris trichiura TTRE_0000926501 I 0.463
M407DRAFT_45884 Tulasnella calospora M407DRAFT_45884 I 0.463
RO3G_10448 Rhizopus oryzae RO3G_10448 I 0.461
GLOINDRAFT_14857 Rhizophagus irregularis GLOINDRAFT_14857 N 0.460
GLOINDRAFT_15291 Rhizophagus irregularis GLOINDRAFT_15291 N 0.460
SJAG_04009 Schizosaccharomyces japonicus SJAG_04009 I 0.459
D918_02095 Trichuris suis D918_02095 I 0.456
CC1G_13679 Coprinopsis cinerea CC1G_13679 I 0.455
Pc18g06680 Penicillium chrysogenum Pc18g06680 I 0.450
PCH_Pc18g06680 Penicillium rubens PCH_Pc18g06680 I 0.450
Moror_2734 Moniliophthora roreri Moror_2734 I 0.450
GGTG_04596 Gaeumannomyces graminis GGTG_04596 I 0.449
TRIATDRAFT_28325 Trichoderma atroviride TRIATDRAFT_28325 I 0.449
Kpol_401p4 Vanderwaltozyma polyspora Kpol_401p4 I 0.448
GNLVRS01_PISO0K11912g Millerozyma farinosa GNLVRS01_PISO0K11912g I 0.448
GNLVRS01_PISO0L11913g Millerozyma farinosa GNLVRS01_PISO0L11913g I 0.448
DEHA2E09460g Debaryomyces hansenii DEHA2E09460g I 0.448
EV44_g3421 Erysiphe necator EV44_g3421 I 0.448
PredSwiss_ASS2010_4380.1 Pneumocystis carinii PredSwiss_ASS2010_4380.1 I 0.447
PNEG_02134 Pneumocystis murina PNEG_02134 I 0.447
PredSwiss_CON587.2 Pneumocystis carinii PredSwiss_CON587.2 I 0.447
PredSwiss_EST856.1 Pneumocystis carinii PredSwiss_EST856.1 I 0.447
HelroG147528 Helobdella robusta HelroG147528 I 0.446
GLOINDRAFT_18435 Rhizophagus irregularis GLOINDRAFT_18435 N 0.446
CC1G_08141 Coprinopsis cinerea CC1G_08141 I 0.445
BN946_scf184994.g56 Trametes cinnabarina BN946_scf184994.g56 I 0.445
TRIREDRAFT_34248 Trichoderma reesei TRIREDRAFT_34248 I 0.445
TDEL_0H02760 Torulaspora delbrueckii TDEL_0H02760 I 0.443
NDAI_0E03570 Naumovozyma dairenensis NDAI_0E03570 I 0.442
LELG_00108 Lodderomyces elongisporus LELG_00108 I 0.442
BATDEDRAFT_7482 Batrachochytrium dendrobatidis BATDEDRAFT_7482 I 0.442
CPAG_04451 Candida parapsilosis CPAG_04451 I 0.442
GGTG_01301 Gaeumannomyces graminis GGTG_01301 I 0.441
TBLA_0J01680 Tetrapisispora blattae TBLA_0J01680 I 0.441
ZBAI_00827 Zygosaccharomyces bailii ZBAI_00827 I 0.439
fgeneshPB_pg.2__1074 Phycomyces blakesleeanus fgeneshPB_pg.2__1074 I 0.439
ZYRO0D15312g Zygosaccharomyces rouxii ZYRO0D15312g I 0.439
GLOINDRAFT_327467 Rhizophagus irregularis GLOINDRAFT_327467 N 0.439
ZBAI_06138 Zygosaccharomyces bailii ZBAI_06138 I 0.439
fgeneshMC_pg.3_#_188 Mucor circinelloides fgeneshMC_pg.3_#_188 I 0.438
KAFR_0H00950 Kazachstania africana KAFR_0H00950 I 0.438
XP_002490896.1 Pichia pastoris XP_002490896.1 I 0.438
EPUS_01429 Endocarpon pusillum EPUS_01429 I 0.438
fgeneshMC_pg.3_#_1116 Mucor circinelloides fgeneshMC_pg.3_#_1116 I 0.438
M378DRAFT_12668 Amanita muscaria M378DRAFT_12668 N 0.438
PAS_chr2-1_0017 Komagataella pastoris PAS_chr2-1_0017 I 0.438
Scas_Contig667.28 Saccharomyces castellii Scas_Contig667.28 I 0.438
SAKL0F03872g Lachancea kluyveri SAKL0F03872g I 0.438
NCAS_0A11120 Naumovozyma castellii NCAS_0A11120 I 0.438
KUCA_T00002521001 Kuraishia capsulata KUCA_T00002521001 I 0.436
SMAC_07212 Sordaria macrospora SMAC_07212 I 0.435
NEUTE1DRAFT_123419 Neurospora tetrasperma NEUTE1DRAFT_123419 I 0.435
NCU03481 Neurospora crassa NCU03481 I 0.435
GLOINDRAFT_51431 Rhizophagus irregularis GLOINDRAFT_51431 I 0.434
NEUTE1DRAFT_103050 Neurospora tetrasperma NEUTE1DRAFT_103050 I 0.434
MGG_03959 Magnaporthe oryzae MGG_03959 I 0.434
estExt_fgenesh1_pg.C_20723 Cryphonectria parasitica estExt_fgenesh1_pg.C_20723 I 0.433
PTRG_06171 Pyrenophora triticirepentis PTRG_06171 I 0.433
PTT_07342 Pyrenophora teres PTT_07342 I 0.433
LEMA_P042400.1 Leptosphaeria maculans LEMA_P042400.1 I 0.433
BN946_scf184844.g28 Trametes cinnabarina BN946_scf184844.g28 I 0.433
GLOINDRAFT_342407 Rhizophagus irregularis GLOINDRAFT_342407 N 0.432
TSTA_076640 Talaromyces stipitatus TSTA_076640 I 0.432
AUEXF2481DRAFT_9186 Aureobasidium subglaciale AUEXF2481DRAFT_9186 I 0.432
M437DRAFT_59097 Aureobasidium melanogenum M437DRAFT_59097 I 0.432
GALMADRAFT_213842 Galerina marginata GALMADRAFT_213842 I 0.432
GLOINDRAFT_26890 Rhizophagus irregularis GLOINDRAFT_26890 N 0.432
M438DRAFT_356450 Aureobasidium pullulans M438DRAFT_356450 I 0.432
GLOINDRAFT_14799 Rhizophagus irregularis GLOINDRAFT_14799 N 0.432
Moror_8177 Moniliophthora roreri Moror_8177 I 0.431
HPODL_00225 Ogataea parapolymorpha HPODL_00225 I 0.431
K443DRAFT_126060 Laccaria amethystina K443DRAFT_126060 I 0.431
fgenesh1_pg.C_scaffold_14000043 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_14000043 I 0.431
fgeneshMC_pg.8_#_228 Mucor circinelloides fgeneshMC_pg.8_#_228 I 0.431
LACBIDRAFT_327972 Laccaria bicolor LACBIDRAFT_327972 I 0.431
FGRRES_01366 Fusarium graminearum FGRRES_01366 I 0.430
FPSE_11538 Fusarium pseudograminearum FPSE_11538 I 0.430
FOXG_00011 Fusarium oxysporum FOXG_00011 I 0.430
FFUJ_01566 Fusarium fujikuroi FFUJ_01566 I 0.430
BGHDH14_bgh06642 Blumeria graminis BGHDH14_bgh06642 I 0.430
FVEG_01504 Fusarium verticillioides FVEG_01504 I 0.430
estExt_fgenesh1_pg.C_10913 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10913 I 0.429
CORT_0A01160 Candida orthopsilosis CORT_0A01160 I 0.429
SEPMUDRAFT_153151 Sphaerulina musiva SEPMUDRAFT_153151 I 0.429
DICSQDRAFT_156845 Dichomitus squalens DICSQDRAFT_156845 I 0.429
MYCFIDRAFT_86029 Pseudocercospora fijiensis MYCFIDRAFT_86029 I 0.429
SAKL0B07656g Lachancea kluyveri SAKL0B07656g I 0.428
MAPG_06541 Magnaporthe poae MAPG_06541 I 0.428
SBAD_0000333601 Soboliphyme baturini SBAD_0000333601 I 0.428
Kwal_21061 Kluyveromyces waltii Kwal_21061 I 0.427
SPPG_01987 Spizellomyces punctatus SPPG_01987 I 0.427
Cflo_05874--XP_001121937.1_APIME Camponotus floridanus Cflo_05874--XP_001121937.1_APIME I 0.427
KLTH0F13926g Lachancea thermotolerans KLTH0F13926g I 0.427
KLTH0F13926g Kluyveromyces thermotolerans KLTH0F13926g I 0.427
PAXRUDRAFT_95391 Paxillus rubicundulus PAXRUDRAFT_95391 I 0.427
23192_YPR065W Saccharomyces paradoxus 23192_YPR065W I 0.426
TMUE_s0100003000 Trichuris muris TMUE_s0100003000 I 0.426
KNAG_0H00720 Kazachstania naganishii KNAG_0H00720 I 0.426
AB07238.1 Alternaria brassicicola AB07238.1 I 0.426
ENSPMAG00000007384 Petromyzon marinus ENSPMAG00000007384 I 0.426
Ecym_3473 Eremothecium cymbalariae Ecym_3473 I 0.426
COCCADRAFT_38231 Bipolaris zeicola COCCADRAFT_38231 I 0.426
COCSADRAFT_171253 Bipolaris sorokiniana COCSADRAFT_171253 I 0.426
COCMIDRAFT_87821 Bipolaris oryzae COCMIDRAFT_87821 I 0.426
AACERI_AaceriADL331C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL331C I 0.426
COCVIDRAFT_34603 Bipolaris victoriae COCVIDRAFT_34603 I 0.426
SU7_3656 Saccharomyces arboricola SU7_3656 I 0.426
ROX1 Saccharomyces cerevisiae YPR065W D 0.426
AGOS_ADL331C Ashbya gossypii AGOS_ADL331C I 0.426
COCC4DRAFT_168040 Bipolaris maydis COCC4DRAFT_168040 I 0.426
22516_YPR065W Saccharomyces mikatae 22516_YPR065W I 0.426
M422DRAFT_89750 Sphaerobolus stellatus M422DRAFT_89750 I 0.426
FIBRA_03355 Fibroporia radiculosa FIBRA_03355 I 0.426
SNOG_07773 Stagonospora nodorum SNOG_07773 I 0.426
PPAI002806 Phlebotomus papatasi PPAI002806 I 0.425
HETIRDRAFT_244598 Heterobasidion irregulare HETIRDRAFT_244598 I 0.425
M408DRAFT_11440 Serendipita vermifera M408DRAFT_11440 I 0.425
gw1.1.1214.1 Heterobasidion annosum gw1.1.1214.1 I 0.425
sox6 Tetraodon nigroviridis ENSTNIG00000009384 I 0.424
ENSPFOG00000006435 Poecilia formosa ENSPFOG00000006435 I 0.424
sox6b Oryzias latipes ENSORLG00000006705 I 0.424
TVAG_344020 Trichomonas vaginalis TVAG_344020 I 0.424
ENSONIG00000006148 Oreochromis niloticus ENSONIG00000006148 I 0.424
sox6 Takifugu rubripes ENSTRUG00000017299 I 0.424
ENSPMAG00000006026 Petromyzon marinus ENSPMAG00000006026 I 0.424
PHLGIDRAFT_89850 Phlebiopsis gigantea PHLGIDRAFT_89850 I 0.424
PHACADRAFT_251524 Phanerochaete carnosa PHACADRAFT_251524 I 0.424
MESCA006024 Megaselia scalaris MESCA006024 I 0.424
ENSXMAG00000007070 Xiphophorus maculatus ENSXMAG00000007070 I 0.424
CC1G_06427 Coprinopsis cinerea CC1G_06427 N 0.424
HelroG78096 Helobdella robusta HelroG78096 I 0.423
LCUP008527 Lucilia cuprina LCUP008527 I 0.422
AGABI2DRAFT_176060 Agaricus bisporus AGABI2DRAFT_176060 I 0.422
MDOA009711 Musca domestica MDOA009711 I 0.422
fgenesh1_pg.C_scaffold_7000434 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000434 I 0.422
GI20689 Drosophila mojavensis FBgn0143424 I 0.422
M437DRAFT_74676 Aureobasidium melanogenum M437DRAFT_74676 I 0.422
Minc14114 Meloidogyne incognita Minc14114 I 0.422
M438DRAFT_346080 Aureobasidium pullulans M438DRAFT_346080 I 0.422
CERSUDRAFT_118854 Ceriporiopsis subvermispora CERSUDRAFT_118854 I 0.422
fgeneshPB_pg.2__774 Phycomyces blakesleeanus fgeneshPB_pg.2__774 I 0.421
RO3G_12867 Rhizopus oryzae RO3G_12867 I 0.421
KAFR_0G02830 Kazachstania africana KAFR_0G02830 I 0.421
GK10637 Drosophila willistoni FBgn0212650 I 0.420
SEPMUDRAFT_160654 Sphaerulina musiva SEPMUDRAFT_160654 I 0.420
FIBRA_04764 Fibroporia radiculosa FIBRA_04764 I 0.420
RSKR_0000922300 Rhabditophanes kr3021 RSKR_0000922300 I 0.420
PTRK_0001690900 Parastrongyloides trichosuri PTRK_0001690900 I 0.420
SBOR_5980 Sclerotinia borealis SBOR_5980 I 0.419
SS1G_01161 Sclerotinia sclerotiorum SS1G_01161 I 0.419
MBM_05950 Marssonina brunnea MBM_05950 I 0.419
Sakowv30020282m.g Saccoglossus kowalevskii Sakowv30020282m.g I 0.419
Bcin11g05790 Botrytis cinerea Bcin11g05790 I 0.419
OIDMADRAFT_144579 Oidiodendron maius OIDMADRAFT_144579 I 0.419
AUEXF2481DRAFT_37338 Aureobasidium subglaciale AUEXF2481DRAFT_37338 I 0.419
BXY_0674500 Bursaphelenchus xylophilus BXY_0674500 I 0.417
Sox14 Drosophila melanogaster FBgn0005612 D 0.417
SMAR010316 Strigamia maritima SMAR010316 I 0.417
GG22917 Drosophila erecta FBgn0115074 I 0.417
GA15918 Drosophila pseudoobscura FBgn0075934 I 0.417
GL11646 Drosophila persimilis FBgn0149255 I 0.417
GLOINDRAFT_13510 Rhizophagus irregularis GLOINDRAFT_13510 N 0.417
GE14354 Drosophila yakuba FBgn0231966 I 0.417
RO3G_12690 Rhizopus oryzae RO3G_12690 I 0.417
ENSCING00000015003 Ciona intestinalis ENSCING00000015003 I 0.417
GM16076 Drosophila sechellia FBgn0170992 I 0.417
HelroG74924 Helobdella robusta HelroG74924 I 0.416
GSTUM_00001090001 Tuber melanosporum GSTUM_00001090001 I 0.416
GLOINDRAFT_96919 Rhizophagus irregularis GLOINDRAFT_96919 N 0.416
GLOINDRAFT_75094 Rhizophagus irregularis GLOINDRAFT_75094 I 0.416
GLOINDRAFT_52776 Rhizophagus irregularis GLOINDRAFT_52776 I 0.416
M7I_5540 Glarea lozoyensis M7I_5540 I 0.416
A1O3_06089 Capronia epimyces A1O3_06089 I 0.415
BN7_1833 Wickerhamomyces ciferrii BN7_1833 I 0.415
G210_0578 Candida maltosa G210_0578 I 0.415
GALMADRAFT_775072 Galerina marginata GALMADRAFT_775072 I 0.415
NEMVEDRAFT_v1g207820 Nematostella vectensis NEMVEDRAFT_v1g207820 I 0.415
CD36_27640 Candida dubliniensis CD36_27640 I 0.415
CGI_10003991 Crassostrea gigas CGI_10003991 I 0.415
SPAPADRAFT_59824 Spathaspora passalidarum SPAPADRAFT_59824 I 0.415
CTRG_00834 Candida tropicalis CTRG_00834 I 0.415
PICST_67218 Scheffersomyces stipitis PICST_67218 I 0.415
CaO19.10341 Candida albicans CaO19.10341 I 0.415
GJ21897 Drosophila virilis FBgn0209014 I 0.415
NEMVEDRAFT_v1g19525 Nematostella vectensis NEMVEDRAFT_v1g19525 I 0.415
estExt_fgenesh1_pg.C_chr_3.10092 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10092 I 0.415
BOTBODRAFT_111636 Botryobasidium botryosum BOTBODRAFT_111636 I 0.415