L798_02329 (Zootermopsis nevadensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 L798_02329 T330832_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bbx
M03975_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN

NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
bbx_1
0.688 0.696
BBX
M05763_2.00
Homo sapiens
TGAWCDNYGWTCA

TGAWCRNHGWTCA
SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX
0.546 0.638
BBX
M05764_2.00
Homo sapiens
TGAACDNYGTTCA

TGAACRNHGTTCA
SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX
0.546 0.638
Bbx
M00196_2.00
Mus musculus
TTCATTGA

TCAATGAA
PBM
Badis et al.(2009)
Bbx_3753
0.513 0.623
gei-3
M00711_2.00
Caenorhabditis elegans
NWNWMWDN

NHWKWNWN
PBM
Narasimhan et al.(2015)
pTH10038
0.476 0.580
Cic
M00195_2.00
Mus musculus
NNTGCTGABN

NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.448 0.594
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDR08064 Sox 56 124

Links

Other Sox family TFs
Other Zootermopsis nevadensis TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_30822 Aegilops tauschii F775_30822 I 0.000
AMTR_s00001p00266470 Amborella trichopoda AMTR_s00001p00266470 I 0.000
Aquca_013_00471 Aquilegia coerulea Aquca_013_00471 I 0.000
scaffold_801621.1 Arabidopsis lyrata scaffold_801621.1 I 0.000
AGL14 Arabidopsis lyrata fgenesh2_kg.6__3138__AT4G11880.1 I 0.000
AGL20 Arabidopsis lyrata scaffold_403512.1 I 0.000
AGL72 Arabidopsis thaliana AT5G51860 I 0.000
SOC1 Arabidopsis thaliana AT2G45660 D 0.000
AGL14 Arabidopsis thaliana AT4G11880 I 0.000
AGL42 Arabidopsis thaliana AT5G62165 D 0.000
Bostr.25463s0138 Boechera stricta Bostr.25463s0138 I 0.000
Bostr.15774s0333 Boechera stricta Bostr.15774s0333 I 0.000
Bostr.26833s0022 Boechera stricta Bostr.26833s0022 I 0.000
Bostr.25993s0208 Boechera stricta Bostr.25993s0208 I 0.000
Bostr.7867s0353 Boechera stricta Bostr.7867s0353 I 0.000
BRADI1G48520 Brachypodium distachyon BRADI1G48520 I 0.000
BRADI4G40350 Brachypodium distachyon BRADI4G40350 I 0.000
BRADI3G32090 Brachypodium distachyon BRADI3G32090 I 0.000
Bo9g103660 Brassica oleracea Bo9g103660 I 0.000
Bo1g040180 Brassica oleracea Bo1g040180 I 0.000
Bo2g162920 Brassica oleracea Bo2g162920 I 0.000
Bo3g038880 Brassica oleracea Bo3g038880 I 0.000
Bo4g195720 Brassica oleracea Bo4g195720 I 0.000
Bo6g076090 Brassica oleracea Bo6g076090 I 0.000
Bo7g098670 Brassica oleracea Bo7g098670 I 0.000
Bo00946s010 Brassica oleracea Bo00946s010 I 0.000
Bo8g050720 Brassica oleracea Bo8g050720 I 0.000
Bo7g110310 Brassica oleracea Bo7g110310 I 0.000
Bra035907 Brassica rapa Bra035907 I 0.000
Bra039324 Brassica rapa Bra039324 I 0.000
Bra000393 Brassica rapa Bra000393 I 0.000
Bra003356 Brassica rapa Bra003356 I 0.000
Bra013891 Brassica rapa Bra013891 I 0.000
Bra028282 Brassica rapa Bra028282 I 0.000
Bra029155 Brassica rapa Bra029155 I 0.000
Bra029281 Brassica rapa Bra029281 I 0.000
PK09312.1 Cannabis sativa PK09312.1 I 0.000
Cagra.0542s0040 Capsella grandiflora Cagra.0542s0040 I 0.000
Cagra.7242s0001 Capsella grandiflora Cagra.7242s0001 I 0.000
Cagra.4003s0006 Capsella grandiflora Cagra.4003s0006 I 0.000
Cagra.2248s0020 Capsella grandiflora Cagra.2248s0020 I 0.000
Cagra.0277s0030 Capsella grandiflora Cagra.0277s0030 I 0.000
Cagra.0050s0134 Capsella grandiflora Cagra.0050s0134 I 0.000
Carubv10027529m.g Capsella rubella Carubv10027529m.g I 0.000
Carubv10024046m.g Capsella rubella Carubv10024046m.g I 0.000
Carubv10027142m.g Capsella rubella Carubv10027142m.g I 0.000
Carubv10026982m.g Capsella rubella Carubv10026982m.g I 0.000
Carubv10001906m.g Capsella rubella Carubv10001906m.g I 0.000
evm.TU.supercontig_4.204 Carica papaya evm.TU.supercontig_4.204 I 0.000
evm.TU.supercontig_18.166 Carica papaya evm.TU.supercontig_18.166 I 0.000
Cla011687 Citrullus lanatus Cla011687 I 0.000
Cla006326 Citrullus lanatus Cla006326 I 0.000
Cla002388 Citrullus lanatus Cla002388 I 0.000
Ciclev10006654m.g Citrus clementina Ciclev10006654m.g I 0.000
Ciclev10022568m.g Citrus clementina Ciclev10022568m.g I 0.000
Ciclev10023160m.g Citrus clementina Ciclev10023160m.g I 0.000
orange1.1g027691m.g Citrus sinensis orange1.1g027691m.g I 0.000
orange1.1g028363m.g Citrus sinensis orange1.1g028363m.g I 0.000
orange1.1g033826m.g Citrus sinensis orange1.1g033826m.g I 0.000
Cucsa.302640 Cucumis sativus Cucsa.302640 I 0.000
Cucsa.251140 Cucumis sativus Cucsa.251140 I 0.000
Cucsa.115490 Cucumis sativus Cucsa.115490 I 0.000
Eucgr.K00197 Eucalyptus grandis Eucgr.K00197 I 0.000
Eucgr.K00194 Eucalyptus grandis Eucgr.K00194 I 0.000
Eucgr.K00193 Eucalyptus grandis Eucgr.K00193 I 0.000
Eucgr.K00192 Eucalyptus grandis Eucgr.K00192 I 0.000
Eucgr.K00191 Eucalyptus grandis Eucgr.K00191 I 0.000
Eucgr.K00190 Eucalyptus grandis Eucgr.K00190 I 0.000
Eucgr.E00516 Eucalyptus grandis Eucgr.E00516 I 0.000
Eucgr.D02425 Eucalyptus grandis Eucgr.D02425 I 0.000
Eucgr.D01939 Eucalyptus grandis Eucgr.D01939 I 0.000
Eucgr.C01942 Eucalyptus grandis Eucgr.C01942 I 0.000
Eucgr.K00199 Eucalyptus grandis Eucgr.K00199 I 0.000
Eucgr.K00200 Eucalyptus grandis Eucgr.K00200 I 0.000
Eucgr.A02846 Eucalyptus grandis Eucgr.A02846 I 0.000
Eucgr.K00202 Eucalyptus grandis Eucgr.K00202 I 0.000
Eucgr.K00208 Eucalyptus grandis Eucgr.K00208 I 0.000
Eucgr.K00207 Eucalyptus grandis Eucgr.K00207 I 0.000
Eucgr.K00204 Eucalyptus grandis Eucgr.K00204 I 0.000
Eucgr.K00203 Eucalyptus grandis Eucgr.K00203 I 0.000
Eucgr.K00201 Eucalyptus grandis Eucgr.K00201 I 0.000
Thhalv10004954m.g Eutrema salsugineum Thhalv10004954m.g I 0.000
Thhalv10014716m.g Eutrema salsugineum Thhalv10014716m.g I 0.000
Thhalv10028949m.g Eutrema salsugineum Thhalv10028949m.g I 0.000
Thhalv10026205m.g Eutrema salsugineum Thhalv10026205m.g I 0.000
Thhalv10001632m.g Eutrema salsugineum Thhalv10001632m.g I 0.000
gene13354-v1.0-hybrid Fragaria vesca gene13354-v1.0-hybrid I 0.000
GLYMA08G12730 Glycine max GLYMA08G12730 I 0.000
GLYMA20G29300 Glycine max GLYMA20G29300 I 0.000
GLYMA18G45780 Glycine max GLYMA18G45780 I 0.000
GLYMA17G14191 Glycine max GLYMA17G14191 I 0.000
GLYMA10G38541 Glycine max GLYMA10G38541 I 0.000
GLYMA09G40230 Glycine max GLYMA09G40230 I 0.000
GLYMA07G08831 Glycine max GLYMA07G08831 I 0.000
GLYMA05G29595 Glycine max GLYMA05G29595 I 0.000
GLYMA05G03660 Glycine max GLYMA05G03660 I 0.000
GLYMA03G02191 Glycine max GLYMA03G02191 I 0.000
Gorai.004G132000 Gossypium raimondii Gorai.004G132000 I 0.000
Gorai.007G009800 Gossypium raimondii Gorai.007G009800 I 0.000
Gorai.008G115200 Gossypium raimondii Gorai.008G115200 I 0.000
Gorai.005G221300 Gossypium raimondii Gorai.005G221300 I 0.000
MLOC_57890 Hordeum vulgare MLOC_57890 I 0.000
LPERR02G00370 Leersia perrieri LPERR02G00370 I 0.000
LPERR12G05240 Leersia perrieri LPERR12G05240 I 0.000
LPERR10G12950 Leersia perrieri LPERR10G12950 I 0.000
LPERR06G03790 Leersia perrieri LPERR06G03790 I 0.000
Lus10014144.g Linum usitatissimum Lus10014144.g I 0.000
Lus10006716.g Linum usitatissimum Lus10006716.g I 0.000
Lus10039580.g Linum usitatissimum Lus10039580.g I 0.000
Lus10031665.g Linum usitatissimum Lus10031665.g I 0.000
Lus10027404.g Linum usitatissimum Lus10027404.g I 0.000
Lus10005325.g Linum usitatissimum Lus10005325.g I 0.000
Lus10006715.g Linum usitatissimum Lus10006715.g I 0.000
Lus10014143.g Linum usitatissimum Lus10014143.g I 0.000
chr4.CM0126.630.nc Lotus japonicus chr4.CM0126.630.nc I 0.000
chr1.CM0163.120.nc Lotus japonicus chr1.CM0163.120.nc I 0.000
MDP0000200272 Malus domestica MDP0000200272 I 0.000
MDP0000060753 Malus domestica MDP0000060753 I 0.000
MDP0000144597 Malus domestica MDP0000144597 I 0.000
MDP0000314765 Malus domestica MDP0000314765 I 0.000
MDP0000462145 Malus domestica MDP0000462145 I 0.000
cassava21331.m1 Manihot esculenta cassava21331.m1 I 0.000
cassava30125.valid.m1 Manihot esculenta cassava30125.valid.m1 I 0.000
cassava35068.m1 Manihot esculenta cassava35068.m1 I 0.000
cassava723.valid.m1 Manihot esculenta cassava723.valid.m1 I 0.000
MTR_7g075870 Medicago truncatula MTR_7g075870 I 0.000
MTR_8g033220 Medicago truncatula MTR_8g033220 I 0.000
mgf007062m Mimulus guttatus mgf007062m I 0.000
mgf001038m Mimulus guttatus mgf001038m I 0.000
mgf005831m Mimulus guttatus mgf005831m I 0.000
GSMUA_Achr2G04340_001 Musa acuminata GSMUA_Achr2G04340_001 I 0.000
GSMUA_Achr8G12280_001 Musa acuminata GSMUA_Achr8G12280_001 I 0.000
OBART10G16960 Oryza barthii OBART10G16960 I 0.000
OBART12G05940 Oryza barthii OBART12G05940 I 0.000
OBART06G04180 Oryza barthii OBART06G04180 I 0.000
OB12G15620 Oryza brachyantha OB12G15620 I 0.000
OB06G13870 Oryza brachyantha OB06G13870 I 0.000
OB10G24040 Oryza brachyantha OB10G24040 I 0.000
ORGLA06G0038600 Oryza glaberrima ORGLA06G0038600 I 0.000
ORGLA10G0119200 Oryza glaberrima ORGLA10G0119200 I 0.000
ORGLA12G0056500 Oryza glaberrima ORGLA12G0056500 I 0.000
OGLUM10G16960 Oryza glumaepatula OGLUM10G16960 I 0.000
OGLUM06G04290 Oryza glumaepatula OGLUM06G04290 I 0.000
OGLUM12G07150 Oryza glumaepatula OGLUM12G07150 I 0.000
MADS56 Oryza indica BGIOSGA033356 I 0.000
MADS5 Oryza indica BGIOSGA021849 I 0.000
OLONG_017665 Oryza longistaminata OLONG_017665 I 0.000
OLONG_009999 Oryza longistaminata OLONG_009999 I 0.000
OLONG_006914 Oryza longistaminata OLONG_006914 I 0.000
OLONG_005831 Oryza longistaminata OLONG_005831 I 0.000
OMERI10G13430 Oryza meridionalis OMERI10G13430 I 0.000
OMERI12G04040 Oryza meridionalis OMERI12G04040 I 0.000
OMERI06G04850 Oryza meridionalis OMERI06G04850 I 0.000
ONIVA10G18680 Oryza nivara ONIVA10G18680 I 0.000
ONIVA06G05400 Oryza nivara ONIVA06G05400 I 0.000
ONIVA12G05640 Oryza nivara ONIVA12G05640 I 0.000
OPUNC12G05660 Oryza punctata OPUNC12G05660 I 0.000
OPUNC06G04000 Oryza punctata OPUNC06G04000 I 0.000
ORUFI12G06810 Oryza rufipogon ORUFI12G06810 I 0.000
ORUFI10G17990 Oryza rufipogon ORUFI10G17990 I 0.000
ORUFI06G04180 Oryza rufipogon ORUFI06G04180 I 0.000
MADS5 Oryza sativa OS06G0162800 D 0.000
MADS56 Oryza sativa OS10G0536100 I 0.000
MADS13 Oryza sativa OS12G0207000 I 0.000
Q9ATE7_PETHY Petunia x hybrida Q9ATE7_PETHY D 0.000
POPTR_0002s15310 Populus trichocarpa POPTR_0002s15310 I 0.000
Pm019404 Prunus mume Pm019404 I 0.000
Pm018089 Prunus mume Pm018089 I 0.000
Pm018087 Prunus mume Pm018087 I 0.000
PRUPE_ppa019267mg Prunus persica PRUPE_ppa019267mg I 0.000
PRUPE_ppa019932mg Prunus persica PRUPE_ppa019932mg I 0.000
PRUPE_ppa014428mg Prunus persica PRUPE_ppa014428mg I 0.000
30147.m014133 Ricinus communis 30147.m014133 I 0.000
SapurV1A.0400s0250 Salix purpurea SapurV1A.0400s0250 I 0.000
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I 0.000
SapurV1A.0024s0570 Salix purpurea SapurV1A.0024s0570 I 0.000
SapurV1A.0068s0650 Salix purpurea SapurV1A.0068s0650 I 0.000
Si019985m.g Setaria italica Si019985m.g I 0.000
Si007226m.g Setaria italica Si007226m.g I 0.000
Solyc03g006830.2 Solanum lycopersicum Solyc03g006830.2 I 0.000
Solyc08g080100.2 Solanum lycopersicum Solyc08g080100.2 I 0.000
Solyc06g035570.1 Solanum lycopersicum Solyc06g035570.1 I 0.000
Solyc12g056460.1 Solanum lycopersicum Solyc12g056460.1 I 0.000
PGSC0003DMG400000008 Solanum tuberosum PGSC0003DMG400000008 I 0.000
PGSC0003DMG400025279 Solanum tuberosum PGSC0003DMG400025279 I 0.000
PGSC0003DMG401024252 Solanum tuberosum PGSC0003DMG401024252 I 0.000
PGSC0003DMG400022748 Solanum tuberosum PGSC0003DMG400022748 I 0.000
Sb10g004390 Sorghum bicolor Sb10g004390 I 0.000
TCM_016147 Theobroma cacao TCM_016147 I 0.000
TCM_005456 Theobroma cacao TCM_005456 I 0.000
TCM_015049 Theobroma cacao TCM_015049 I 0.000
Traes_5AS_7BFB385EF Triticum aestivum Traes_5AS_7BFB385EF I 0.000
Traes_5BS_A19FD8E34 Triticum aestivum Traes_5BS_A19FD8E34 I 0.000
Traes_5DS_16243E52C Triticum aestivum Traes_5DS_16243E52C I 0.000
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.000
TRIUR3_28215 Triticum urartu TRIUR3_28215 I 0.000
VIT_16s0022g02400 Vitis vinifera VIT_16s0022g02400 I 0.000