CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MESCA012239
(
Megaselia scalaris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
MESCA012239
T331263_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SoxN
M03976_2.00
Drosophila melanogaster
VYGHACARTNN
NNAYTGTDCRB
SELEX
Nitta et al.(2015)
SoxN_1
0.364
1.000
SoxN
M03977_2.00
Drosophila melanogaster
NCAATNVCATTGN
NCAATGBNATTGN
SELEX
Nitta et al.(2015)
SoxN_2
0.364
1.000
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MESCA012239-PA
Sox
1
42
NSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYK
Links
Other
Sox
family TFs
Other
Megaselia scalaris
TFs
235 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy